Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 ERG-202ENST00000398897 4651 ntTSL 5 BASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 TAB3P1-202ENST00000452645 1634 ntBASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 DOCK11P1-201ENST00000553480 5932 ntBASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 RNA5SP510-201ENST00000364697 99 ntBASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 RNU6-1106P-201ENST00000390845 107 ntBASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 CISD1P1-201ENST00000393907 327 ntBASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 AL157702.1-201ENST00000398764 426 ntBASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 AL603766.1-201ENST00000407763 664 ntBASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 AL139128.1-201ENST00000413921 941 ntBASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 AL353678.1-201ENST00000422735 741 ntBASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 SDCBPP2-201ENST00000424643 885 ntBASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 AC008267.5-201ENST00000424928 265 ntBASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 ARL5AP3-201ENST00000439327 386 ntBASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 RAB28P3-201ENST00000448325 597 ntBASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 RPL7L1P3-201ENST00000455249 689 ntBASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 CST12P-201ENST00000457644 362 ntBASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 RPL38P1-201ENST00000460914 211 ntBASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 RPL17P2-201ENST00000491913 451 ntBASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 HMGB1P30-201ENST00000492455 606 ntBASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 AC103851.1-201ENST00000506833 274 ntBASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 AP005639.1-201ENST00000526939 192 ntBASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 OR5AP1P-201ENST00000529730 940 ntBASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 AL512310.1-201ENST00000548639 172 ntBASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 AC079905.1-201ENST00000549280 475 ntBASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 OTX2-203ENST00000554559 715 ntTSL 5 BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 MIR4443-201ENST00000585052 53 ntBASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 AC005357.1-201ENST00000588399 301 ntBASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 ANKRD36BP1-201ENST00000358576 1779 ntBASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 TEK-204ENST00000519097 3836 ntTSL 2 BASIC8.09□□□□□ -1.11
PDZRN3Q9UPQ7 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
PDZRN3Q9UPQ7 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC8.09□□□□□ -1.12
PDZRN3Q9UPQ7 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC8.09□□□□□ -1.12
PDZRN3Q9UPQ7 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 AC105235.1-201ENST00000623208 1816 ntBASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 LINC01616-201ENST00000561816 2280 ntBASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 AC027575.3-201ENST00000583058 2747 ntBASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 RNU2-64P-201ENST00000411315 191 ntBASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 HMGB3P20-201ENST00000417997 600 ntBASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 SNRPEP10-201ENST00000420249 274 ntBASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 AC245517.2-201ENST00000442890 346 ntBASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 RN7SL165P-201ENST00000477476 291 ntBASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 AC091544.1-201ENST00000484702 348 ntBASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 SNX18P24-201ENST00000505249 671 ntBASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 RNA5SP271-201ENST00000516700 88 ntBASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC8.08□□□□□ -1.12
PDZRN3Q9UPQ7 IGHV4-55-201ENST00000520889 368 ntBASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms