Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TREX1Q9NSU2 AL732292.1-201ENST00000426692 226 ntBASIC4.24□□□□□ -1.73
TREX1Q9NSU2 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.24□□□□□ -1.73
TREX1Q9NSU2 RPL23AP89-201ENST00000439324 255 ntBASIC4.24□□□□□ -1.73
TREX1Q9NSU2 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.24□□□□□ -1.73
TREX1Q9NSU2 EEF1A1P1-201ENST00000447052 739 ntBASIC4.24□□□□□ -1.73
TREX1Q9NSU2 EIF2S2P5-201ENST00000457635 968 ntBASIC4.24□□□□□ -1.73
TREX1Q9NSU2 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.24□□□□□ -1.73
TREX1Q9NSU2 RPL7AP28-201ENST00000464513 571 ntBASIC4.24□□□□□ -1.73
TREX1Q9NSU2 RN7SL585P-201ENST00000470538 280 ntBASIC4.24□□□□□ -1.73
TREX1Q9NSU2 AC096741.1-201ENST00000472250 846 ntBASIC4.24□□□□□ -1.73
TREX1Q9NSU2 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.24□□□□□ -1.73
TREX1Q9NSU2 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TREX1Q9NSU2 AC083829.1-201ENST00000503756 657 ntBASIC4.24□□□□□ -1.73
TREX1Q9NSU2 HAUS1P1-201ENST00000505275 832 ntBASIC4.24□□□□□ -1.73
TREX1Q9NSU2 HMGB3P13-201ENST00000511263 607 ntBASIC4.24□□□□□ -1.73
TREX1Q9NSU2 OR8X1P-201ENST00000534542 869 ntBASIC4.24□□□□□ -1.73
TREX1Q9NSU2 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.24□□□□□ -1.73
TREX1Q9NSU2 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.24□□□□□ -1.73
TREX1Q9NSU2 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.24□□□□□ -1.73
TREX1Q9NSU2 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.24□□□□□ -1.73
TREX1Q9NSU2 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.24□□□□□ -1.73
TREX1Q9NSU2 RPL26P30-202ENST00000602923 645 ntBASIC4.24□□□□□ -1.73
TREX1Q9NSU2 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.24□□□□□ -1.73
TREX1Q9NSU2 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TREX1Q9NSU2 AC020763.5-201ENST00000623298 430 ntBASIC4.24□□□□□ -1.73
TREX1Q9NSU2 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
TREX1Q9NSU2 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.24□□□□□ -1.73
TREX1Q9NSU2 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
TREX1Q9NSU2 AC009313.2-201ENST00000417893 1941 ntBASIC4.24□□□□□ -1.73
TREX1Q9NSU2 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TREX1Q9NSU2 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
TREX1Q9NSU2 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TREX1Q9NSU2 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
TREX1Q9NSU2 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TREX1Q9NSU2 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
TREX1Q9NSU2 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
TREX1Q9NSU2 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
TREX1Q9NSU2 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
TREX1Q9NSU2 Z73965.1-201ENST00000623412 2297 ntBASIC4.23□□□□□ -1.73
TREX1Q9NSU2 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
TREX1Q9NSU2 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
TREX1Q9NSU2 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
TREX1Q9NSU2 RNU6-146P-201ENST00000384602 108 ntBASIC4.23□□□□□ -1.73
TREX1Q9NSU2 SNORA11B-201ENST00000408175 129 ntBASIC4.23□□□□□ -1.73
TREX1Q9NSU2 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.23□□□□□ -1.73
TREX1Q9NSU2 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.23□□□□□ -1.73
TREX1Q9NSU2 P2RY10P2-201ENST00000416730 913 ntBASIC4.23□□□□□ -1.73
TREX1Q9NSU2 AC004690.1-201ENST00000418216 328 ntBASIC4.23□□□□□ -1.73
TREX1Q9NSU2 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.23□□□□□ -1.73
TREX1Q9NSU2 OR2X1P-201ENST00000421144 687 ntBASIC4.23□□□□□ -1.73
TREX1Q9NSU2 MTND4LP13-201ENST00000425022 298 ntBASIC4.23□□□□□ -1.73
TREX1Q9NSU2 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.23□□□□□ -1.73
TREX1Q9NSU2 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.23□□□□□ -1.73
TREX1Q9NSU2 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.23□□□□□ -1.73
TREX1Q9NSU2 MTCO3P17-201ENST00000443775 513 ntBASIC4.23□□□□□ -1.73
TREX1Q9NSU2 TXNP2-201ENST00000443918 295 ntBASIC4.23□□□□□ -1.73
TREX1Q9NSU2 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.23□□□□□ -1.73
TREX1Q9NSU2 SBDSP1-204ENST00000453858 737 ntBASIC4.23□□□□□ -1.73
TREX1Q9NSU2 RAD23BP3-201ENST00000454157 1152 ntBASIC4.23□□□□□ -1.73
TREX1Q9NSU2 NDUFA12P1-201ENST00000455914 406 ntBASIC4.23□□□□□ -1.73
TREX1Q9NSU2 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.23□□□□□ -1.73
TREX1Q9NSU2 AC006517.1-201ENST00000480485 328 ntBASIC4.23□□□□□ -1.73
TREX1Q9NSU2 RPL35P6-201ENST00000490024 372 ntBASIC4.23□□□□□ -1.73
TREX1Q9NSU2 AC113398.2-201ENST00000507630 558 ntBASIC4.23□□□□□ -1.73
TREX1Q9NSU2 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.23□□□□□ -1.73
TREX1Q9NSU2 RNA5SP49-201ENST00000516450 115 ntBASIC4.23□□□□□ -1.73
TREX1Q9NSU2 RNA5SP519-201ENST00000516480 119 ntBASIC4.23□□□□□ -1.73
TREX1Q9NSU2 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.23□□□□□ -1.73
TREX1Q9NSU2 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.23□□□□□ -1.73
TREX1Q9NSU2 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.23□□□□□ -1.73
TREX1Q9NSU2 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.23□□□□□ -1.73
TREX1Q9NSU2 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.23□□□□□ -1.73
TREX1Q9NSU2 FAM106CP-201ENST00000582212 507 ntBASIC4.23□□□□□ -1.73
TREX1Q9NSU2 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.23□□□□□ -1.73
TREX1Q9NSU2 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TREX1Q9NSU2 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.23□□□□□ -1.73
TREX1Q9NSU2 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.23□□□□□ -1.73
TREX1Q9NSU2 MIR6715B-201ENST00000637172 77 ntBASIC4.23□□□□□ -1.73
TREX1Q9NSU2 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TREX1Q9NSU2 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.23□□□□□ -1.73
TREX1Q9NSU2 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TREX1Q9NSU2 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
TREX1Q9NSU2 AC092079.1-201ENST00000558620 1985 ntBASIC4.23□□□□□ -1.73
TREX1Q9NSU2 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.23□□□□□ -1.73
TREX1Q9NSU2 AC139713.2-214ENST00000642059 1811 ntBASIC4.23□□□□□ -1.73
TREX1Q9NSU2 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.23□□□□□ -1.73
TREX1Q9NSU2 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
TREX1Q9NSU2 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
TREX1Q9NSU2 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
TREX1Q9NSU2 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
TREX1Q9NSU2 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
TREX1Q9NSU2 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
TREX1Q9NSU2 RNA5SP388-201ENST00000362584 119 ntBASIC4.22□□□□□ -1.73
TREX1Q9NSU2 MIR513A2-201ENST00000385249 127 ntBASIC4.22□□□□□ -1.73
TREX1Q9NSU2 RPS4XP9-201ENST00000405151 780 ntBASIC4.22□□□□□ -1.73
TREX1Q9NSU2 RNA5SP36-201ENST00000410197 133 ntBASIC4.22□□□□□ -1.73
TREX1Q9NSU2 RNU6-603P-201ENST00000411403 107 ntBASIC4.22□□□□□ -1.73
TREX1Q9NSU2 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.22□□□□□ -1.73
TREX1Q9NSU2 AL450992.3-201ENST00000413192 568 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms