Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
SALL1Q9NSC2 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.14□□□□□ -1.59
SALL1Q9NSC2 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SALL1Q9NSC2 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SALL1Q9NSC2 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SALL1Q9NSC2 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SALL1Q9NSC2 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SALL1Q9NSC2 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SALL1Q9NSC2 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
SALL1Q9NSC2 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SALL1Q9NSC2 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SALL1Q9NSC2 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SALL1Q9NSC2 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.13□□□□□ -1.59
SALL1Q9NSC2 MAPK10-303ENST00000641324 3959 ntBASIC5.13□□□□□ -1.59
SALL1Q9NSC2 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SALL1Q9NSC2 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SALL1Q9NSC2 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SALL1Q9NSC2 RN7SKP280-201ENST00000364196 304 ntBASIC5.13□□□□□ -1.59
SALL1Q9NSC2 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SALL1Q9NSC2 VN1R8P-201ENST00000407739 893 ntBASIC5.13□□□□□ -1.59
SALL1Q9NSC2 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.13□□□□□ -1.59
SALL1Q9NSC2 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.13□□□□□ -1.59
SALL1Q9NSC2 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.13□□□□□ -1.59
SALL1Q9NSC2 TRGV7-201ENST00000427089 353 ntBASIC5.13□□□□□ -1.59
SALL1Q9NSC2 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.13□□□□□ -1.59
SALL1Q9NSC2 AL356276.2-201ENST00000435919 558 ntBASIC5.13□□□□□ -1.59
SALL1Q9NSC2 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.13□□□□□ -1.59
SALL1Q9NSC2 FCF1P7-201ENST00000451185 558 ntBASIC5.13□□□□□ -1.59
SALL1Q9NSC2 AC079804.1-201ENST00000461922 436 ntBASIC5.13□□□□□ -1.59
SALL1Q9NSC2 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SALL1Q9NSC2 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SALL1Q9NSC2 AC108064.1-201ENST00000513791 460 ntBASIC5.13□□□□□ -1.59
SALL1Q9NSC2 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.13□□□□□ -1.59
SALL1Q9NSC2 SNORD116-30-201ENST00000516468 85 ntBASIC5.13□□□□□ -1.59
SALL1Q9NSC2 RNA5SP360-201ENST00000516555 118 ntBASIC5.13□□□□□ -1.59
SALL1Q9NSC2 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.13□□□□□ -1.59
SALL1Q9NSC2 AC025857.1-201ENST00000525252 377 ntBASIC5.13□□□□□ -1.59
SALL1Q9NSC2 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.13□□□□□ -1.59
SALL1Q9NSC2 EIF1AXP2-201ENST00000555940 413 ntBASIC5.13□□□□□ -1.59
SALL1Q9NSC2 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.13□□□□□ -1.59
SALL1Q9NSC2 AC096586.2-201ENST00000610260 441 ntBASIC5.13□□□□□ -1.59
SALL1Q9NSC2 AC010608.2-201ENST00000624830 470 ntBASIC5.13□□□□□ -1.59
SALL1Q9NSC2 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SALL1Q9NSC2 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SALL1Q9NSC2 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.13□□□□□ -1.59
SALL1Q9NSC2 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SALL1Q9NSC2 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SALL1Q9NSC2 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SALL1Q9NSC2 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SALL1Q9NSC2 OR51C1P-202ENST00000641159 1444 ntBASIC5.12□□□□□ -1.59
SALL1Q9NSC2 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
SALL1Q9NSC2 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.12□□□□□ -1.59
SALL1Q9NSC2 AC067945.1-201ENST00000342609 618 ntBASIC5.12□□□□□ -1.59
SALL1Q9NSC2 MIR372-201ENST00000362225 67 ntBASIC5.12□□□□□ -1.59
SALL1Q9NSC2 ENSAP1-201ENST00000392855 326 ntBASIC5.12□□□□□ -1.59
SALL1Q9NSC2 SNORA11C-201ENST00000408532 129 ntBASIC5.12□□□□□ -1.59
SALL1Q9NSC2 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.12□□□□□ -1.59
SALL1Q9NSC2 PTP4A1P1-201ENST00000420539 515 ntBASIC5.12□□□□□ -1.59
SALL1Q9NSC2 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.12□□□□□ -1.59
SALL1Q9NSC2 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.12□□□□□ -1.59
SALL1Q9NSC2 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.12□□□□□ -1.59
SALL1Q9NSC2 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.12□□□□□ -1.59
SALL1Q9NSC2 PSMC1P13-201ENST00000458195 985 ntBASIC5.12□□□□□ -1.59
SALL1Q9NSC2 AC113398.2-201ENST00000507630 558 ntBASIC5.12□□□□□ -1.59
SALL1Q9NSC2 AC026402.1-201ENST00000513642 170 ntBASIC5.12□□□□□ -1.59
SALL1Q9NSC2 RFPL4AP3-201ENST00000515267 345 ntBASIC5.12□□□□□ -1.59
SALL1Q9NSC2 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.12□□□□□ -1.59
SALL1Q9NSC2 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.12□□□□□ -1.59
SALL1Q9NSC2 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SALL1Q9NSC2 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.12□□□□□ -1.59
SALL1Q9NSC2 MIR7151-201ENST00000617477 60 ntBASIC5.12□□□□□ -1.59
SALL1Q9NSC2 AC112484.5-201ENST00000624189 228 ntBASIC5.12□□□□□ -1.59
SALL1Q9NSC2 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.12□□□□□ -1.59
SALL1Q9NSC2 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
SALL1Q9NSC2 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SALL1Q9NSC2 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SALL1Q9NSC2 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
SALL1Q9NSC2 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SALL1Q9NSC2 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SALL1Q9NSC2 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SALL1Q9NSC2 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SALL1Q9NSC2 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.11□□□□□ -1.59
SALL1Q9NSC2 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
SALL1Q9NSC2 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SALL1Q9NSC2 RNA5SP130-201ENST00000364431 114 ntBASIC5.11□□□□□ -1.59
SALL1Q9NSC2 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
SALL1Q9NSC2 SNORA37-201ENST00000384504 129 ntBASIC5.11□□□□□ -1.59
SALL1Q9NSC2 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.11□□□□□ -1.59
SALL1Q9NSC2 OR13Z1P-201ENST00000416141 834 ntBASIC5.11□□□□□ -1.59
SALL1Q9NSC2 BMS1P19-201ENST00000433925 393 ntBASIC5.11□□□□□ -1.59
SALL1Q9NSC2 MAPRE1P3-201ENST00000435438 796 ntBASIC5.11□□□□□ -1.59
SALL1Q9NSC2 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.11□□□□□ -1.59
SALL1Q9NSC2 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.11□□□□□ -1.59
SALL1Q9NSC2 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SALL1Q9NSC2 OR52A4P-203ENST00000498233 1014 ntBASIC5.11□□□□□ -1.59
SALL1Q9NSC2 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.11□□□□□ -1.59
SALL1Q9NSC2 BNIP3P41-201ENST00000503774 571 ntBASIC5.11□□□□□ -1.59
SALL1Q9NSC2 DYNLL1P4-201ENST00000549314 266 ntBASIC5.11□□□□□ -1.59
SALL1Q9NSC2 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.11□□□□□ -1.59
SALL1Q9NSC2 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms