Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.94□□□□□ -1.78
CHD8Q9HCK8 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.94□□□□□ -1.78
CHD8Q9HCK8 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.94□□□□□ -1.78
CHD8Q9HCK8 AL049634.3-201ENST00000604968 457 ntBASIC3.94□□□□□ -1.78
CHD8Q9HCK8 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.94□□□□□ -1.78
CHD8Q9HCK8 BDP1P-201ENST00000582658 1990 ntBASIC3.94□□□□□ -1.78
CHD8Q9HCK8 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CHD8Q9HCK8 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CHD8Q9HCK8 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CHD8Q9HCK8 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CHD8Q9HCK8 AC016745.2-201ENST00000608834 3443 ntBASIC3.94□□□□□ -1.78
CHD8Q9HCK8 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
CHD8Q9HCK8 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CHD8Q9HCK8 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CHD8Q9HCK8 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC3.94□□□□□ -1.78
CHD8Q9HCK8 RNU1-59P-201ENST00000364829 162 ntBASIC3.94□□□□□ -1.78
CHD8Q9HCK8 UBA52P6-201ENST00000399822 382 ntBASIC3.94□□□□□ -1.78
CHD8Q9HCK8 AC005300.1-201ENST00000428401 373 ntBASIC3.94□□□□□ -1.78
CHD8Q9HCK8 ATP5HP2-201ENST00000433885 485 ntBASIC3.94□□□□□ -1.78
CHD8Q9HCK8 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC3.94□□□□□ -1.78
CHD8Q9HCK8 RPL21P13-201ENST00000488305 481 ntBASIC3.94□□□□□ -1.78
CHD8Q9HCK8 AC021193.1-201ENST00000511607 420 ntBASIC3.94□□□□□ -1.78
CHD8Q9HCK8 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC3.94□□□□□ -1.78
CHD8Q9HCK8 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.94□□□□□ -1.78
CHD8Q9HCK8 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.94□□□□□ -1.78
CHD8Q9HCK8 AC090312.1-201ENST00000580637 348 ntBASIC3.94□□□□□ -1.78
CHD8Q9HCK8 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC3.94□□□□□ -1.78
CHD8Q9HCK8 AC015726.1-201ENST00000602353 681 ntBASIC3.94□□□□□ -1.78
CHD8Q9HCK8 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.94□□□□□ -1.78
CHD8Q9HCK8 U1.25-201ENST00000614085 162 ntBASIC3.94□□□□□ -1.78
CHD8Q9HCK8 U1.34-201ENST00000618578 162 ntBASIC3.94□□□□□ -1.78
CHD8Q9HCK8 U1.31-201ENST00000620022 160 ntBASIC3.94□□□□□ -1.78
CHD8Q9HCK8 AC000095.2-202ENST00000637415 154 ntBASIC3.94□□□□□ -1.78
CHD8Q9HCK8 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CHD8Q9HCK8 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC3.94□□□□□ -1.78
CHD8Q9HCK8 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC3.94□□□□□ -1.78
CHD8Q9HCK8 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CHD8Q9HCK8 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CHD8Q9HCK8 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.93□□□□□ -1.78
CHD8Q9HCK8 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CHD8Q9HCK8 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.93□□□□□ -1.78
CHD8Q9HCK8 HNRNPA1P29-201ENST00000426409 879 ntBASIC3.93□□□□□ -1.78
CHD8Q9HCK8 TMED11P-201ENST00000479478 690 ntBASIC3.93□□□□□ -1.78
CHD8Q9HCK8 RN7SKP141-201ENST00000516167 338 ntBASIC3.93□□□□□ -1.78
CHD8Q9HCK8 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.93□□□□□ -1.78
CHD8Q9HCK8 AC027176.2-201ENST00000559166 746 ntBASIC3.93□□□□□ -1.78
CHD8Q9HCK8 MIR7106-201ENST00000612419 65 ntBASIC3.93□□□□□ -1.78
CHD8Q9HCK8 MIR8058-201ENST00000615737 89 ntBASIC3.93□□□□□ -1.78
CHD8Q9HCK8 AC007998.5-201ENST00000622938 237 ntBASIC3.93□□□□□ -1.78
CHD8Q9HCK8 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.93□□□□□ -1.78
CHD8Q9HCK8 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC3.93□□□□□ -1.78
CHD8Q9HCK8 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CHD8Q9HCK8 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC3.93□□□□□ -1.78
CHD8Q9HCK8 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.93□□□□□ -1.78
CHD8Q9HCK8 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CHD8Q9HCK8 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CHD8Q9HCK8 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CHD8Q9HCK8 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
CHD8Q9HCK8 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CHD8Q9HCK8 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC3.93□□□□□ -1.78
CHD8Q9HCK8 AC104058.1-201ENST00000448028 297 ntBASIC3.93□□□□□ -1.78
CHD8Q9HCK8 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.93□□□□□ -1.78
CHD8Q9HCK8 FABP3P2-201ENST00000453169 399 ntBASIC3.93□□□□□ -1.78
CHD8Q9HCK8 AC027667.1-201ENST00000545814 304 ntBASIC3.93□□□□□ -1.78
CHD8Q9HCK8 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.93□□□□□ -1.78
CHD8Q9HCK8 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.93□□□□□ -1.78
CHD8Q9HCK8 AC008013.2-202ENST00000637965 364 ntBASIC3.93□□□□□ -1.78
CHD8Q9HCK8 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.93□□□□□ -1.78
CHD8Q9HCK8 AL445487.1-201ENST00000415694 1580 ntBASIC3.92□□□□□ -1.78
CHD8Q9HCK8 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CHD8Q9HCK8 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CHD8Q9HCK8 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CHD8Q9HCK8 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.92□□□□□ -1.78
CHD8Q9HCK8 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CHD8Q9HCK8 AC008155.2-201ENST00000464337 397 ntBASIC3.92□□□□□ -1.78
CHD8Q9HCK8 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.92□□□□□ -1.78
CHD8Q9HCK8 AC023509.5-201ENST00000617434 807 ntBASIC3.92□□□□□ -1.78
CHD8Q9HCK8 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC3.92□□□□□ -1.78
CHD8Q9HCK8 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.92□□□□□ -1.78
CHD8Q9HCK8 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CHD8Q9HCK8 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CHD8Q9HCK8 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC3.92□□□□□ -1.78
CHD8Q9HCK8 PEX12P1-201ENST00000400284 1048 ntBASIC3.92□□□□□ -1.78
CHD8Q9HCK8 AL590806.1-201ENST00000415818 853 ntBASIC3.92□□□□□ -1.78
CHD8Q9HCK8 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.92□□□□□ -1.78
CHD8Q9HCK8 HPRT1P2-201ENST00000505250 544 ntBASIC3.92□□□□□ -1.78
CHD8Q9HCK8 YWHAEP4-201ENST00000505390 198 ntBASIC3.92□□□□□ -1.78
CHD8Q9HCK8 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.92□□□□□ -1.78
CHD8Q9HCK8 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.92□□□□□ -1.78
CHD8Q9HCK8 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.92□□□□□ -1.78
CHD8Q9HCK8 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.92□□□□□ -1.78
CHD8Q9HCK8 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
CHD8Q9HCK8 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.92□□□□□ -1.78
CHD8Q9HCK8 AC009120.7-201ENST00000623452 780 ntBASIC3.92□□□□□ -1.78
CHD8Q9HCK8 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CHD8Q9HCK8 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CHD8Q9HCK8 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CHD8Q9HCK8 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CHD8Q9HCK8 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC3.92□□□□□ -1.78
CHD8Q9HCK8 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 147.4 ms