Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 OR2L1P-202ENST00000641567 1023 ntBASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 AC096656.1-201ENST00000623826 1364 ntBASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LRRC40Q9H9A6 AC017002.4-201ENST00000604721 1525 ntBASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 SNORA58B-201ENST00000364259 136 ntBASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 AC013404.1-201ENST00000413068 249 ntBASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 SKP1P3-201ENST00000429280 487 ntBASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 AL606490.7-201ENST00000433136 191 ntBASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 AC006466.1-201ENST00000438721 289 ntBASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 RPS27AP17-201ENST00000463344 455 ntBASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 RPS26P28-201ENST00000470806 348 ntBASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 FABP5P6-201ENST00000510588 409 ntBASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 AC108120.2-201ENST00000512973 294 ntBASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 NDUFB4P12-201ENST00000513465 390 ntBASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 SNORD116-26-201ENST00000516006 96 ntBASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 AP000827.1-201ENST00000527814 258 ntBASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 TRAV11-201ENST00000539512 339 ntBASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 AC051619.2-201ENST00000559063 397 ntBASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 RPL23AP97-201ENST00000568955 471 ntBASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 AC069061.3-201ENST00000582254 823 ntBASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 AC022387.2-201ENST00000604050 448 ntBASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 AL160290.3-201ENST00000604869 165 ntBASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 BNIP3P7-201ENST00000605641 516 ntBASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 Z98200.1-201ENST00000607298 470 ntBASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 AC020634.1-201ENST00000608701 549 ntBASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 SNX18P1Y-201ENST00000616231 511 ntBASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 AP001784.1-201ENST00000624107 428 ntBASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 AL049536.1-201ENST00000625043 744 ntBASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LRRC40Q9H9A6 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
LRRC40Q9H9A6 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LRRC40Q9H9A6 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LRRC40Q9H9A6 AL592437.2-201ENST00000421655 2434 ntBASIC4.5□□□□□ -1.69
LRRC40Q9H9A6 Z73965.1-201ENST00000623412 2297 ntBASIC4.5□□□□□ -1.69
LRRC40Q9H9A6 RNU1-108P-201ENST00000362556 161 ntBASIC4.5□□□□□ -1.69
LRRC40Q9H9A6 RNU6-152P-201ENST00000384037 107 ntBASIC4.5□□□□□ -1.69
LRRC40Q9H9A6 DHFRP5-201ENST00000406944 564 ntBASIC4.5□□□□□ -1.69
LRRC40Q9H9A6 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.5□□□□□ -1.69
LRRC40Q9H9A6 UQCRBP1-201ENST00000421129 336 ntBASIC4.5□□□□□ -1.69
LRRC40Q9H9A6 GTF2IP2-201ENST00000424290 697 ntBASIC4.5□□□□□ -1.69
LRRC40Q9H9A6 IPMKP1-201ENST00000425988 855 ntBASIC4.5□□□□□ -1.69
LRRC40Q9H9A6 AC073335.1-201ENST00000427776 363 ntBASIC4.5□□□□□ -1.69
LRRC40Q9H9A6 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.5□□□□□ -1.69
LRRC40Q9H9A6 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.5□□□□□ -1.69
LRRC40Q9H9A6 AL606490.8-201ENST00000441624 319 ntBASIC4.5□□□□□ -1.69
LRRC40Q9H9A6 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.5□□□□□ -1.69
LRRC40Q9H9A6 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.5□□□□□ -1.69
LRRC40Q9H9A6 AC023512.1-201ENST00000444513 499 ntBASIC4.5□□□□□ -1.69
LRRC40Q9H9A6 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.5□□□□□ -1.69
LRRC40Q9H9A6 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.5□□□□□ -1.69
LRRC40Q9H9A6 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.5□□□□□ -1.69
LRRC40Q9H9A6 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.5□□□□□ -1.69
LRRC40Q9H9A6 RPL35AP28-201ENST00000459730 331 ntBASIC4.5□□□□□ -1.69
LRRC40Q9H9A6 RPL7P48-201ENST00000461513 746 ntBASIC4.5□□□□□ -1.69
LRRC40Q9H9A6 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.5□□□□□ -1.69
LRRC40Q9H9A6 AC011037.1-201ENST00000483964 558 ntBASIC4.5□□□□□ -1.69
LRRC40Q9H9A6 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.5□□□□□ -1.69
LRRC40Q9H9A6 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.5□□□□□ -1.69
LRRC40Q9H9A6 AC016550.3-201ENST00000515706 767 ntBASIC4.5□□□□□ -1.69
LRRC40Q9H9A6 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.5□□□□□ -1.69
LRRC40Q9H9A6 AC074029.2-201ENST00000551045 634 ntBASIC4.5□□□□□ -1.69
LRRC40Q9H9A6 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.5□□□□□ -1.69
LRRC40Q9H9A6 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.5□□□□□ -1.69
LRRC40Q9H9A6 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.5□□□□□ -1.69
LRRC40Q9H9A6 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms