Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC010300.1-201ENST00000600671 5134 ntBASIC4.52□□□□□ -1.69
TRIM4Q9C037 MIR365B-201ENST00000362317 111 ntBASIC4.52□□□□□ -1.69
TRIM4Q9C037 BX510359.2-201ENST00000417920 305 ntBASIC4.52□□□□□ -1.69
TRIM4Q9C037 PTP4A1P1-201ENST00000420539 515 ntBASIC4.52□□□□□ -1.69
TRIM4Q9C037 RWDD4P2-201ENST00000426392 563 ntBASIC4.52□□□□□ -1.69
TRIM4Q9C037 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM4Q9C037 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.52□□□□□ -1.69
TRIM4Q9C037 AC004938.1-201ENST00000438468 308 ntBASIC4.52□□□□□ -1.69
TRIM4Q9C037 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM4Q9C037 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.52□□□□□ -1.69
TRIM4Q9C037 SYT14P1-201ENST00000481459 721 ntBASIC4.52□□□□□ -1.69
TRIM4Q9C037 RWDD4P1-201ENST00000488019 565 ntBASIC4.52□□□□□ -1.69
TRIM4Q9C037 AC112184.1-201ENST00000505179 312 ntBASIC4.52□□□□□ -1.69
TRIM4Q9C037 AC106806.2-201ENST00000509365 500 ntBASIC4.52□□□□□ -1.69
TRIM4Q9C037 AC008694.2-201ENST00000517591 306 ntBASIC4.52□□□□□ -1.69
TRIM4Q9C037 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM4Q9C037 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM4Q9C037 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM4Q9C037 IFITM8P-201ENST00000522529 394 ntBASIC4.52□□□□□ -1.69
TRIM4Q9C037 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM4Q9C037 RFPL1S-203ENST00000539579 330 ntBASIC4.52□□□□□ -1.69
TRIM4Q9C037 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.52□□□□□ -1.69
TRIM4Q9C037 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM4Q9C037 AC027455.1-201ENST00000574104 594 ntBASIC4.52□□□□□ -1.69
TRIM4Q9C037 AC053481.3-201ENST00000577881 843 ntBASIC4.52□□□□□ -1.69
TRIM4Q9C037 SNORA74C-1-201ENST00000580726 201 ntBASIC4.52□□□□□ -1.69
TRIM4Q9C037 AC007497.1-201ENST00000610421 561 ntBASIC4.52□□□□□ -1.69
TRIM4Q9C037 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.52□□□□□ -1.69
TRIM4Q9C037 AC019206.1-201ENST00000621938 425 ntBASIC4.52□□□□□ -1.69
TRIM4Q9C037 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.52□□□□□ -1.69
TRIM4Q9C037 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM4Q9C037 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM4Q9C037 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
TRIM4Q9C037 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.52□□□□□ -1.69
TRIM4Q9C037 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM4Q9C037 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM4Q9C037 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
TRIM4Q9C037 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM4Q9C037 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM4Q9C037 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
TRIM4Q9C037 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.51□□□□□ -1.69
TRIM4Q9C037 AL627171.1-201ENST00000618845 1308 ntBASIC4.51□□□□□ -1.69
TRIM4Q9C037 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.51□□□□□ -1.69
TRIM4Q9C037 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.51□□□□□ -1.69
TRIM4Q9C037 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM4Q9C037 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
TRIM4Q9C037 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM4Q9C037 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM4Q9C037 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM4Q9C037 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
TRIM4Q9C037 U3.30-201ENST00000391308 210 ntBASIC4.51□□□□□ -1.69
TRIM4Q9C037 AL049697.2-201ENST00000403708 294 ntBASIC4.51□□□□□ -1.69
TRIM4Q9C037 ZNF603P-201ENST00000405613 487 ntBASIC4.51□□□□□ -1.69
TRIM4Q9C037 RPL36AP36-201ENST00000418616 301 ntBASIC4.51□□□□□ -1.69
TRIM4Q9C037 GLUD1P9-201ENST00000420997 1173 ntBASIC4.51□□□□□ -1.69
TRIM4Q9C037 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.51□□□□□ -1.69
TRIM4Q9C037 TRGV7-201ENST00000427089 353 ntBASIC4.51□□□□□ -1.69
TRIM4Q9C037 RPL12P28-201ENST00000430852 489 ntBASIC4.51□□□□□ -1.69
TRIM4Q9C037 NRBF2P3-201ENST00000432731 865 ntBASIC4.51□□□□□ -1.69
TRIM4Q9C037 ARL4AP4-201ENST00000434170 518 ntBASIC4.51□□□□□ -1.69
TRIM4Q9C037 RPS17P8-201ENST00000434525 335 ntBASIC4.51□□□□□ -1.69
TRIM4Q9C037 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.51□□□□□ -1.69
TRIM4Q9C037 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.51□□□□□ -1.69
TRIM4Q9C037 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM4Q9C037 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.51□□□□□ -1.69
TRIM4Q9C037 AC006499.6-201ENST00000511169 607 ntBASIC4.51□□□□□ -1.69
TRIM4Q9C037 AC109635.6-201ENST00000525487 1113 ntBASIC4.51□□□□□ -1.69
TRIM4Q9C037 AP001781.1-201ENST00000530977 207 ntBASIC4.51□□□□□ -1.69
TRIM4Q9C037 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.51□□□□□ -1.69
TRIM4Q9C037 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.51□□□□□ -1.69
TRIM4Q9C037 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.51□□□□□ -1.69
TRIM4Q9C037 RN7SL802P-201ENST00000577858 299 ntBASIC4.51□□□□□ -1.69
TRIM4Q9C037 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.51□□□□□ -1.69
TRIM4Q9C037 AC011477.5-201ENST00000586571 259 ntBASIC4.51□□□□□ -1.69
TRIM4Q9C037 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.51□□□□□ -1.69
TRIM4Q9C037 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.51□□□□□ -1.69
TRIM4Q9C037 AL121932.1-201ENST00000605542 214 ntBASIC4.51□□□□□ -1.69
TRIM4Q9C037 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.51□□□□□ -1.69
TRIM4Q9C037 AL121890.3-201ENST00000618494 516 ntBASIC4.51□□□□□ -1.69
TRIM4Q9C037 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.51□□□□□ -1.69
TRIM4Q9C037 CYP1D1P-201ENST00000416662 1433 ntBASIC4.51□□□□□ -1.69
TRIM4Q9C037 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM4Q9C037 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.51□□□□□ -1.69
TRIM4Q9C037 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM4Q9C037 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
TRIM4Q9C037 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
TRIM4Q9C037 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.5□□□□□ -1.69
TRIM4Q9C037 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.5□□□□□ -1.69
TRIM4Q9C037 AC027287.1-201ENST00000553115 1453 ntBASIC4.5□□□□□ -1.69
TRIM4Q9C037 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM4Q9C037 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM4Q9C037 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM4Q9C037 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM4Q9C037 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.5□□□□□ -1.69
TRIM4Q9C037 RNU6-525P-201ENST00000363685 104 ntBASIC4.5□□□□□ -1.69
TRIM4Q9C037 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
TRIM4Q9C037 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TRIM4Q9C037 SNORA70F-201ENST00000384142 135 ntBASIC4.5□□□□□ -1.69
TRIM4Q9C037 OR6C69P-201ENST00000394268 893 ntBASIC4.5□□□□□ -1.69
TRIM4Q9C037 MIR921-201ENST00000401133 56 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms