Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.84□□□□□ -1.31
USB1Q9BQ65 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
USB1Q9BQ65 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.32
USB1Q9BQ65 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
USB1Q9BQ65 AC091812.1-201ENST00000432235 1948 ntBASIC6.84□□□□□ -1.32
USB1Q9BQ65 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
USB1Q9BQ65 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC6.84□□□□□ -1.32
USB1Q9BQ65 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
USB1Q9BQ65 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
USB1Q9BQ65 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
USB1Q9BQ65 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.83□□□□□ -1.32
USB1Q9BQ65 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.83□□□□□ -1.32
USB1Q9BQ65 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
USB1Q9BQ65 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
USB1Q9BQ65 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
USB1Q9BQ65 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
USB1Q9BQ65 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
USB1Q9BQ65 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
USB1Q9BQ65 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
USB1Q9BQ65 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.83□□□□□ -1.32
USB1Q9BQ65 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
USB1Q9BQ65 INO80C-212ENST00000592173 3245 ntTSL 2 BASIC6.83□□□□□ -1.32
USB1Q9BQ65 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
USB1Q9BQ65 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
USB1Q9BQ65 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
USB1Q9BQ65 RNU6-179P-201ENST00000363350 107 ntBASIC6.83□□□□□ -1.32
USB1Q9BQ65 RNA5SP161-201ENST00000363871 115 ntBASIC6.83□□□□□ -1.32
USB1Q9BQ65 RN7SKP50-201ENST00000364694 315 ntBASIC6.83□□□□□ -1.32
USB1Q9BQ65 RNA5SP79-201ENST00000365193 109 ntBASIC6.83□□□□□ -1.32
USB1Q9BQ65 RNU4-2-201ENST00000365668 141 ntBASIC6.83□□□□□ -1.32
USB1Q9BQ65 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
USB1Q9BQ65 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
USB1Q9BQ65 Y_RNA.404-201ENST00000383978 102 ntBASIC6.83□□□□□ -1.32
USB1Q9BQ65 Y_RNA.515-201ENST00000384535 112 ntBASIC6.83□□□□□ -1.32
USB1Q9BQ65 RNA5SP23-201ENST00000391006 105 ntBASIC6.83□□□□□ -1.32
USB1Q9BQ65 SLC2A11-205ENST00000403208 564 ntTSL 4 BASIC6.83□□□□□ -1.32
USB1Q9BQ65 RPL31P45-201ENST00000419532 356 ntBASIC6.83□□□□□ -1.32
USB1Q9BQ65 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC6.83□□□□□ -1.32
USB1Q9BQ65 AC091390.2-201ENST00000432573 374 ntBASIC6.83□□□□□ -1.32
USB1Q9BQ65 AC099344.1-201ENST00000433548 492 ntBASIC6.83□□□□□ -1.32
USB1Q9BQ65 UBE2V1P13-201ENST00000436983 439 ntBASIC6.83□□□□□ -1.32
USB1Q9BQ65 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC6.83□□□□□ -1.32
USB1Q9BQ65 DYNLT3P2-201ENST00000442517 295 ntBASIC6.83□□□□□ -1.32
USB1Q9BQ65 OSTCP8-201ENST00000445117 448 ntBASIC6.83□□□□□ -1.32
USB1Q9BQ65 RBMY2TP-201ENST00000451162 947 ntBASIC6.83□□□□□ -1.32
USB1Q9BQ65 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC6.83□□□□□ -1.32
USB1Q9BQ65 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC6.83□□□□□ -1.32
USB1Q9BQ65 ALG13-214ENST00000482742 620 ntTSL 2 BASIC6.83□□□□□ -1.32
USB1Q9BQ65 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC6.83□□□□□ -1.32
USB1Q9BQ65 AC116337.1-201ENST00000509680 687 ntBASIC6.83□□□□□ -1.32
USB1Q9BQ65 AC012400.1-201ENST00000518452 381 ntBASIC6.83□□□□□ -1.32
USB1Q9BQ65 IGLVIV-64-201ENST00000518581 301 ntBASIC6.83□□□□□ -1.32
USB1Q9BQ65 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC6.83□□□□□ -1.32
USB1Q9BQ65 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC6.83□□□□□ -1.32
USB1Q9BQ65 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC6.83□□□□□ -1.32
USB1Q9BQ65 PHBP2-201ENST00000532859 806 ntBASIC6.83□□□□□ -1.32
USB1Q9BQ65 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
USB1Q9BQ65 AC016152.1-201ENST00000548344 521 ntTSL 3 BASIC6.83□□□□□ -1.32
USB1Q9BQ65 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC6.83□□□□□ -1.32
USB1Q9BQ65 OR11H5P-201ENST00000554039 926 ntBASIC6.83□□□□□ -1.32
USB1Q9BQ65 AL109628.1-201ENST00000556877 366 ntBASIC6.83□□□□□ -1.32
USB1Q9BQ65 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.83□□□□□ -1.32
USB1Q9BQ65 AC090651.1-201ENST00000567865 634 ntBASIC6.83□□□□□ -1.32
USB1Q9BQ65 AC068014.1-201ENST00000576836 413 ntTSL 3 BASIC6.83□□□□□ -1.32
USB1Q9BQ65 RN7SL25P-201ENST00000583862 260 ntBASIC6.83□□□□□ -1.32
USB1Q9BQ65 FXYD1-205ENST00000588607 619 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
USB1Q9BQ65 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC6.83□□□□□ -1.32
USB1Q9BQ65 AC092447.9-201ENST00000603395 144 ntBASIC6.83□□□□□ -1.32
USB1Q9BQ65 AC068234.2-201ENST00000619646 522 ntBASIC6.83□□□□□ -1.32
USB1Q9BQ65 AC015967.1-201ENST00000619893 476 ntBASIC6.83□□□□□ -1.32
USB1Q9BQ65 U1.31-201ENST00000620022 160 ntBASIC6.83□□□□□ -1.32
USB1Q9BQ65 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC6.83□□□□□ -1.32
USB1Q9BQ65 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
USB1Q9BQ65 AC078880.4-201ENST00000617627 1749 ntBASIC6.83□□□□□ -1.32
USB1Q9BQ65 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
USB1Q9BQ65 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
USB1Q9BQ65 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC6.83□□□□□ -1.32
USB1Q9BQ65 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
USB1Q9BQ65 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
USB1Q9BQ65 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
USB1Q9BQ65 NBPF8-201ENST00000583271 5330 ntBASIC6.83□□□□□ -1.32
USB1Q9BQ65 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
USB1Q9BQ65 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.83□□□□□ -1.32
USB1Q9BQ65 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
USB1Q9BQ65 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.83□□□□□ -1.32
USB1Q9BQ65 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC6.82□□□□□ -1.32
USB1Q9BQ65 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
USB1Q9BQ65 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USB1Q9BQ65 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
USB1Q9BQ65 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.82□□□□□ -1.32
USB1Q9BQ65 AC009902.3-201ENST00000606235 2172 ntBASIC6.82□□□□□ -1.32
USB1Q9BQ65 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USB1Q9BQ65 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC6.82□□□□□ -1.32
USB1Q9BQ65 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
USB1Q9BQ65 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
USB1Q9BQ65 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
USB1Q9BQ65 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC6.82□□□□□ -1.32
USB1Q9BQ65 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
USB1Q9BQ65 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
USB1Q9BQ65 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms