Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AC109486.1-201ENST00000486833 374 ntBASIC3.62□□□□□ -1.83
LITAFQ99732 RN7SL814P-201ENST00000487715 300 ntBASIC3.62□□□□□ -1.83
LITAFQ99732 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC3.62□□□□□ -1.83
LITAFQ99732 AC113367.2-201ENST00000505749 160 ntBASIC3.62□□□□□ -1.83
LITAFQ99732 AC093281.2-201ENST00000510153 597 ntBASIC3.62□□□□□ -1.83
LITAFQ99732 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC3.62□□□□□ -1.83
LITAFQ99732 AC113191.1-201ENST00000517759 403 ntBASIC3.62□□□□□ -1.83
LITAFQ99732 IGLVIV-64-201ENST00000518581 301 ntBASIC3.62□□□□□ -1.83
LITAFQ99732 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.62□□□□□ -1.83
LITAFQ99732 AC060788.1-201ENST00000521318 469 ntBASIC3.62□□□□□ -1.83
LITAFQ99732 IGLV3-30-201ENST00000524362 298 ntBASIC3.62□□□□□ -1.83
LITAFQ99732 OR5AK1P-201ENST00000524837 922 ntBASIC3.62□□□□□ -1.83
LITAFQ99732 NANOGNBP2-201ENST00000544753 553 ntBASIC3.62□□□□□ -1.83
LITAFQ99732 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC3.62□□□□□ -1.83
LITAFQ99732 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.62□□□□□ -1.83
LITAFQ99732 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LITAFQ99732 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC3.62□□□□□ -1.83
LITAFQ99732 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.62□□□□□ -1.83
LITAFQ99732 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.62□□□□□ -1.83
LITAFQ99732 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC3.62□□□□□ -1.83
LITAFQ99732 AP005119.1-201ENST00000580956 292 ntBASIC3.62□□□□□ -1.83
LITAFQ99732 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC3.62□□□□□ -1.83
LITAFQ99732 ZNF415P1-201ENST00000582279 1166 ntBASIC3.62□□□□□ -1.83
LITAFQ99732 MIR3611-201ENST00000584484 83 ntBASIC3.62□□□□□ -1.83
LITAFQ99732 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC3.62□□□□□ -1.83
LITAFQ99732 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC3.62□□□□□ -1.83
LITAFQ99732 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC3.62□□□□□ -1.83
LITAFQ99732 U73023.1-201ENST00000603134 700 ntBASIC3.62□□□□□ -1.83
LITAFQ99732 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.62□□□□□ -1.83
LITAFQ99732 AL451049.1-201ENST00000608672 497 ntBASIC3.62□□□□□ -1.83
LITAFQ99732 AC005332.6-201ENST00000613178 446 ntBASIC3.62□□□□□ -1.83
LITAFQ99732 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC3.62□□□□□ -1.83
LITAFQ99732 AL590240.3-201ENST00000621416 943 ntBASIC3.62□□□□□ -1.83
LITAFQ99732 AC124312.6-202ENST00000623624 418 ntBASIC3.62□□□□□ -1.83
LITAFQ99732 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
LITAFQ99732 OR5BE1P-202ENST00000641168 1176 ntBASIC3.62□□□□□ -1.83
LITAFQ99732 AC099063.3-201ENST00000642066 185 ntBASIC3.62□□□□□ -1.83
LITAFQ99732 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LITAFQ99732 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
LITAFQ99732 SMG1P4-204ENST00000523028 4131 ntBASIC3.62□□□□□ -1.83
LITAFQ99732 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
LITAFQ99732 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LITAFQ99732 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
LITAFQ99732 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LITAFQ99732 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC3.62□□□□□ -1.83
LITAFQ99732 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.62□□□□□ -1.83
LITAFQ99732 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
LITAFQ99732 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
LITAFQ99732 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LITAFQ99732 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
LITAFQ99732 AC126323.6-202ENST00000568092 3511 ntBASIC3.62□□□□□ -1.83
LITAFQ99732 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
LITAFQ99732 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.62□□□□□ -1.83
LITAFQ99732 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
LITAFQ99732 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC3.62□□□□□ -1.83
LITAFQ99732 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LITAFQ99732 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
LITAFQ99732 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
LITAFQ99732 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LITAFQ99732 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
LITAFQ99732 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LITAFQ99732 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LITAFQ99732 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
LITAFQ99732 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
LITAFQ99732 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
LITAFQ99732 MRE11P1-201ENST00000464884 2127 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
LITAFQ99732 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LITAFQ99732 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LITAFQ99732 AC083843.3-201ENST00000623679 2186 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LITAFQ99732 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LITAFQ99732 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LITAFQ99732 MAX-203ENST00000341653 330 ntTSL 2 BASIC3.61□□□□□ -1.83
LITAFQ99732 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LITAFQ99732 SUGT1P1-201ENST00000379514 476 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 SNORD116-23-201ENST00000384645 92 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
LITAFQ99732 AL139098.1-201ENST00000407291 389 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 RNA5SP487-201ENST00000410186 122 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 RN7SKP142-201ENST00000411236 328 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.61□□□□□ -1.83
LITAFQ99732 AF274854.1-201ENST00000413236 615 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 AC004022.2-201ENST00000413824 193 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LITAFQ99732 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC3.61□□□□□ -1.83
LITAFQ99732 GRPEL2P2-201ENST00000421856 670 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC3.61□□□□□ -1.83
LITAFQ99732 DYNLL1P7-201ENST00000429273 258 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 MTCO3P21-201ENST00000430791 643 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.61□□□□□ -1.83
LITAFQ99732 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.61□□□□□ -1.83
LITAFQ99732 AC128677.1-201ENST00000436016 442 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 AL031663.1-201ENST00000437445 219 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 RPS24P1-201ENST00000438550 371 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 HMGN1P32-201ENST00000441744 256 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC3.61□□□□□ -1.83
LITAFQ99732 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC3.61□□□□□ -1.83
LITAFQ99732 OR6C5P-201ENST00000452388 923 ntBASIC3.61□□□□□ -1.83
LITAFQ99732 DNAJB5P1-201ENST00000454004 806 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms