Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AL109741.2-201ENST00000455561 343 ntBASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 RPS26P39-201ENST00000469206 341 ntBASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 RN7SL177P-201ENST00000476596 299 ntBASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 RPL23AP44-201ENST00000482216 473 ntBASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 RPS4XP14-201ENST00000493072 781 ntBASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 RNU6-718P-201ENST00000516166 105 ntBASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 AC104417.1-201ENST00000523974 751 ntBASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 AC009101.1-201ENST00000568135 242 ntBASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 AC074051.3-201ENST00000570238 358 ntBASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 AC127024.5-201ENST00000580085 462 ntBASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 AC012254.4-201ENST00000588843 273 ntBASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 VN1R83P-201ENST00000595685 445 ntBASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 AL512329.2-201ENST00000607350 548 ntBASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 AC007497.1-201ENST00000610421 561 ntBASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 AC005618.4-201ENST00000625053 554 ntBASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 SEPT14P19-203ENST00000633205 211 ntBASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDK5RAP1Q96SZ6 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 AC011933.2-201ENST00000578539 2790 ntBASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 AC005294.1-201ENST00000355509 281 ntBASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 Y_RNA.408-201ENST00000383987 102 ntBASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 RNA5SP339-201ENST00000390987 122 ntBASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 ST13P16-201ENST00000401760 781 ntBASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 AL031577.2-201ENST00000404133 280 ntBASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 AL355433.1-201ENST00000422804 300 ntBASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 FAM96AP1-201ENST00000430879 482 ntBASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 RPL7L1P9-201ENST00000431298 745 ntBASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 GSTM5P1-201ENST00000434751 660 ntBASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 LARP1BP3-201ENST00000437229 869 ntBASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 AL354941.1-201ENST00000438600 464 ntBASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 RPL31P20-201ENST00000449593 360 ntBASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 RN7SL30P-201ENST00000488416 306 ntBASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 C1GALT1P3-201ENST00000522049 819 ntBASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 KCTD9P6-201ENST00000522306 950 ntBASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 OR4A43P-201ENST00000532938 908 ntBASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 AL121579.1-201ENST00000555129 305 ntBASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 DUXAP1-201ENST00000556632 463 ntBASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 WISP1-OT1-201ENST00000602893 642 ntBASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 AC007038.2-201ENST00000608095 740 ntBASIC5.68□□□□□ -1.5
CDK5RAP1Q96SZ6 AC092954.2-201ENST00000609103 430 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms