Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CDK5RAP2Q96SN8 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CDK5RAP2Q96SN8 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 RNU4-6P-201ENST00000410804 122 ntBASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 AL445584.1-201ENST00000431451 330 ntBASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 VN1R34P-201ENST00000447387 883 ntBASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 AC012158.1-204ENST00000483430 465 ntBASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 HPRT1P2-201ENST00000505250 544 ntBASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 MIR4444-1-201ENST00000581696 74 ntBASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 MIR4444-2-201ENST00000584390 74 ntBASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 AC107993.1-201ENST00000591343 684 ntBASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 QTRT1P1-201ENST00000604344 1078 ntBASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 AL121772.2-201ENST00000614331 297 ntBASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 AC083843.3-201ENST00000623679 2186 ntBASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 SNORD46.1-201ENST00000364139 104 ntBASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 AL607077.1-201ENST00000401718 499 ntBASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 AL139247.1-201ENST00000422768 325 ntBASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 AP000942.1-201ENST00000463969 747 ntBASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 AC022336.1-201ENST00000475510 337 ntBASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 AC091516.1-201ENST00000549191 703 ntBASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 AC053481.3-201ENST00000577881 843 ntBASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 AC026979.4-201ENST00000606555 645 ntBASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 AC138907.10-201ENST00000623708 983 ntBASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDK5RAP2Q96SN8 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDK5RAP2Q96SN8 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CDK5RAP2Q96SN8 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CDK5RAP2Q96SN8 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CDK5RAP2Q96SN8 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CDK5RAP2Q96SN8 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDK5RAP2Q96SN8 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.82□□□□□ -1.64
CDK5RAP2Q96SN8 OR4A15-201ENST00000314706 1035 ntBASIC4.82□□□□□ -1.64
CDK5RAP2Q96SN8 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.82□□□□□ -1.64
CDK5RAP2Q96SN8 GEMIN8P3-201ENST00000445417 720 ntBASIC4.82□□□□□ -1.64
CDK5RAP2Q96SN8 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.82□□□□□ -1.64
CDK5RAP2Q96SN8 AC108022.1-201ENST00000493466 478 ntBASIC4.82□□□□□ -1.64
CDK5RAP2Q96SN8 PARP4P3-201ENST00000510265 317 ntBASIC4.82□□□□□ -1.64
CDK5RAP2Q96SN8 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.82□□□□□ -1.64
CDK5RAP2Q96SN8 AC007066.2-202ENST00000566531 914 ntBASIC4.82□□□□□ -1.64
CDK5RAP2Q96SN8 HNRNPCP4-201ENST00000571636 900 ntBASIC4.82□□□□□ -1.64
CDK5RAP2Q96SN8 MIR3158-1-201ENST00000583596 81 ntBASIC4.82□□□□□ -1.64
CDK5RAP2Q96SN8 AC019278.1-201ENST00000623516 479 ntBASIC4.82□□□□□ -1.64
CDK5RAP2Q96SN8 SAMMSON-213ENST00000641336 1521 ntBASIC4.82□□□□□ -1.64
CDK5RAP2Q96SN8 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDK5RAP2Q96SN8 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CDK5RAP2Q96SN8 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDK5RAP2Q96SN8 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDK5RAP2Q96SN8 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDK5RAP2Q96SN8 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 RNU6-213P-201ENST00000384051 104 ntBASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 MIR554-201ENST00000384874 96 ntBASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 RN7SKP156-201ENST00000410308 342 ntBASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 RPL23AP89-201ENST00000439324 255 ntBASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 AL133547.1-201ENST00000448546 220 ntBASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 FCF1P7-201ENST00000451185 558 ntBASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 AC110792.1-201ENST00000491826 472 ntBASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.81□□□□□ -1.64
CDK5RAP2Q96SN8 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms