Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.22□□□□□ -1.89
AP1S3Q96PC3 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.22□□□□□ -1.89
AP1S3Q96PC3 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
AP1S3Q96PC3 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
AP1S3Q96PC3 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
AP1S3Q96PC3 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
AP1S3Q96PC3 RNA5SP305-201ENST00000362665 119 ntBASIC3.22□□□□□ -1.89
AP1S3Q96PC3 U8.4-201ENST00000363626 134 ntBASIC3.22□□□□□ -1.89
AP1S3Q96PC3 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
AP1S3Q96PC3 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC3.22□□□□□ -1.89
AP1S3Q96PC3 AL391361.1-201ENST00000405580 489 ntBASIC3.22□□□□□ -1.89
AP1S3Q96PC3 RN7SKP213-201ENST00000410746 298 ntBASIC3.22□□□□□ -1.89
AP1S3Q96PC3 MIR1911-201ENST00000410783 80 ntBASIC3.22□□□□□ -1.89
AP1S3Q96PC3 AL159169.1-201ENST00000421119 127 ntBASIC3.22□□□□□ -1.89
AP1S3Q96PC3 AC002069.1-201ENST00000429649 1159 ntBASIC3.22□□□□□ -1.89
AP1S3Q96PC3 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.22□□□□□ -1.89
AP1S3Q96PC3 PTMAP6-201ENST00000439110 327 ntBASIC3.22□□□□□ -1.89
AP1S3Q96PC3 AL356535.1-201ENST00000440335 398 ntBASIC3.22□□□□□ -1.89
AP1S3Q96PC3 ABCF2P2-201ENST00000450549 296 ntBASIC3.22□□□□□ -1.89
AP1S3Q96PC3 OR52J1P-201ENST00000450596 932 ntBASIC3.22□□□□□ -1.89
AP1S3Q96PC3 AL354710.1-201ENST00000453641 246 ntBASIC3.22□□□□□ -1.89
AP1S3Q96PC3 BX284632.1-201ENST00000478218 541 ntBASIC3.22□□□□□ -1.89
AP1S3Q96PC3 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.22□□□□□ -1.89
AP1S3Q96PC3 RN7SL808P-201ENST00000496066 299 ntBASIC3.22□□□□□ -1.89
AP1S3Q96PC3 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
AP1S3Q96PC3 AC007016.1-201ENST00000512110 244 ntBASIC3.22□□□□□ -1.89
AP1S3Q96PC3 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC3.22□□□□□ -1.89
AP1S3Q96PC3 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
AP1S3Q96PC3 SOX5P1-201ENST00000524155 1127 ntBASIC3.22□□□□□ -1.89
AP1S3Q96PC3 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
AP1S3Q96PC3 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.22□□□□□ -1.89
AP1S3Q96PC3 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.22□□□□□ -1.89
AP1S3Q96PC3 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC3.22□□□□□ -1.89
AP1S3Q96PC3 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC3.22□□□□□ -1.89
AP1S3Q96PC3 MIR4716-201ENST00000579628 84 ntBASIC3.22□□□□□ -1.89
AP1S3Q96PC3 MIR3667-201ENST00000581025 74 ntBASIC3.22□□□□□ -1.89
AP1S3Q96PC3 FAM106CP-201ENST00000582212 507 ntBASIC3.22□□□□□ -1.89
AP1S3Q96PC3 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC3.22□□□□□ -1.89
AP1S3Q96PC3 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.22□□□□□ -1.89
AP1S3Q96PC3 AC011445.2-201ENST00000599274 173 ntBASIC3.22□□□□□ -1.89
AP1S3Q96PC3 AC087763.1-201ENST00000603391 286 ntBASIC3.22□□□□□ -1.89
AP1S3Q96PC3 SUMO2P15-201ENST00000604285 278 ntBASIC3.22□□□□□ -1.89
AP1S3Q96PC3 Z82195.1-201ENST00000604558 398 ntBASIC3.22□□□□□ -1.89
AP1S3Q96PC3 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.22□□□□□ -1.89
AP1S3Q96PC3 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.22□□□□□ -1.89
AP1S3Q96PC3 AC009452.1-201ENST00000640823 606 ntBASIC3.22□□□□□ -1.89
AP1S3Q96PC3 AL590763.1-201ENST00000398297 1545 ntBASIC3.22□□□□□ -1.89
AP1S3Q96PC3 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.22□□□□□ -1.89
AP1S3Q96PC3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.22□□□□□ -1.89
AP1S3Q96PC3 AL356489.2-201ENST00000566968 3528 ntBASIC3.22□□□□□ -1.89
AP1S3Q96PC3 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
AP1S3Q96PC3 AC009229.4-201ENST00000623854 1947 ntBASIC3.21□□□□□ -1.9
AP1S3Q96PC3 RN7SKP269-201ENST00000365545 319 ntBASIC3.21□□□□□ -1.9
AP1S3Q96PC3 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
AP1S3Q96PC3 RAB5CP1-201ENST00000395972 580 ntBASIC3.21□□□□□ -1.9
AP1S3Q96PC3 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.21□□□□□ -1.9
AP1S3Q96PC3 Z98941.1-201ENST00000407764 100 ntBASIC3.21□□□□□ -1.9
AP1S3Q96PC3 RPS20P14-201ENST00000412545 360 ntBASIC3.21□□□□□ -1.9
AP1S3Q96PC3 RSU1P3-201ENST00000412878 835 ntBASIC3.21□□□□□ -1.9
AP1S3Q96PC3 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.21□□□□□ -1.9
AP1S3Q96PC3 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC3.21□□□□□ -1.9
AP1S3Q96PC3 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.21□□□□□ -1.9
AP1S3Q96PC3 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.21□□□□□ -1.9
AP1S3Q96PC3 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.21□□□□□ -1.9
AP1S3Q96PC3 USP12PY-201ENST00000427677 1064 ntBASIC3.21□□□□□ -1.9
AP1S3Q96PC3 AC009263.1-201ENST00000441193 1239 ntBASIC3.21□□□□□ -1.9
AP1S3Q96PC3 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC3.21□□□□□ -1.9
AP1S3Q96PC3 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.21□□□□□ -1.9
AP1S3Q96PC3 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
AP1S3Q96PC3 ANP32BP2-201ENST00000454525 545 ntBASIC3.21□□□□□ -1.9
AP1S3Q96PC3 EIF2S2P4-201ENST00000461070 984 ntBASIC3.21□□□□□ -1.9
AP1S3Q96PC3 RPS27AP17-201ENST00000463344 455 ntBASIC3.21□□□□□ -1.9
AP1S3Q96PC3 RN7SL812P-201ENST00000493791 279 ntBASIC3.21□□□□□ -1.9
AP1S3Q96PC3 MTND4LP2-201ENST00000502312 285 ntBASIC3.21□□□□□ -1.9
AP1S3Q96PC3 AC006499.3-201ENST00000506077 748 ntBASIC3.21□□□□□ -1.9
AP1S3Q96PC3 AC021146.1-201ENST00000511202 716 ntBASIC3.21□□□□□ -1.9
AP1S3Q96PC3 BTF3P13-201ENST00000513224 490 ntBASIC3.21□□□□□ -1.9
AP1S3Q96PC3 RNU6-347P-201ENST00000516658 105 ntBASIC3.21□□□□□ -1.9
AP1S3Q96PC3 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC3.21□□□□□ -1.9
AP1S3Q96PC3 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.21□□□□□ -1.9
AP1S3Q96PC3 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC3.21□□□□□ -1.9
AP1S3Q96PC3 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
AP1S3Q96PC3 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.21□□□□□ -1.9
AP1S3Q96PC3 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
AP1S3Q96PC3 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC3.21□□□□□ -1.9
AP1S3Q96PC3 BGLT3-201ENST00000564523 994 ntBASIC3.21□□□□□ -1.9
AP1S3Q96PC3 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.21□□□□□ -1.9
AP1S3Q96PC3 BMS1P7-201ENST00000602440 1052 ntBASIC3.21□□□□□ -1.9
AP1S3Q96PC3 AC083899.3-201ENST00000603413 594 ntBASIC3.21□□□□□ -1.9
AP1S3Q96PC3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.21□□□□□ -1.9
AP1S3Q96PC3 AC015922.4-201ENST00000612568 690 ntBASIC3.21□□□□□ -1.9
AP1S3Q96PC3 AC019278.1-201ENST00000623516 479 ntBASIC3.21□□□□□ -1.9
AP1S3Q96PC3 AC006065.6-201ENST00000625201 545 ntBASIC3.21□□□□□ -1.9
AP1S3Q96PC3 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC3.21□□□□□ -1.9
AP1S3Q96PC3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
AP1S3Q96PC3 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
AP1S3Q96PC3 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
AP1S3Q96PC3 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.21□□□□□ -1.9
AP1S3Q96PC3 INTS6P1-201ENST00000504674 2530 ntBASIC3.21□□□□□ -1.9
AP1S3Q96PC3 AL139811.1-201ENST00000424779 2299 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms