Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 MIR6730-201ENST00000622213 67 ntBASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC6.09□□□□□ -1.43
CHMP4CQ96CF2 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
CHMP4CQ96CF2 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 RNA5SP123-201ENST00000363244 119 ntBASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 AC104333.2-201ENST00000422630 192 ntBASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 AC009263.1-201ENST00000441193 1239 ntBASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 GTF3AP5-201ENST00000442645 697 ntBASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 CEACAMP7-201ENST00000444105 496 ntBASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 SBDSP1-204ENST00000453858 737 ntBASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 AC073073.1-201ENST00000493920 463 ntBASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 LRRC34P1-201ENST00000542742 915 ntBASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 NDUFB4P11-201ENST00000560510 395 ntBASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 MTCO1P40-201ENST00000574371 625 ntBASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 VN1R84P-201ENST00000593697 235 ntBASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 AC009464.1-201ENST00000615731 469 ntBASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 AC108359.1-201ENST00000616451 1211 ntBASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 AC139769.3-201ENST00000618383 175 ntBASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 AC097655.1-201ENST00000635075 318 ntBASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 CASC19-222ENST00000641321 1173 ntBASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 OFD1P9Y-201ENST00000417699 1491 ntBASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 MFSD8-220ENST00000641243 1422 ntBASIC6.08□□□□□ -1.44
CHMP4CQ96CF2 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 RNU6-249P-201ENST00000363016 102 ntBASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 RNU4-51P-201ENST00000364206 140 ntBASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 RNU4-22P-201ENST00000411058 166 ntBASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 GJA6P-201ENST00000415117 1042 ntBASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 RPS3AP37-201ENST00000419176 745 ntBASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 AC234064.1-201ENST00000436312 247 ntBASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 CBX1P4-201ENST00000439415 457 ntBASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 TPTE2P6-202ENST00000445572 1007 ntBASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 AC091180.1-201ENST00000462104 372 ntBASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 RN7SL329P-201ENST00000467740 299 ntBASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 snoZ278.1-201ENST00000517059 112 ntBASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 AC105031.1-201ENST00000518550 476 ntBASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 OR8A2P-201ENST00000528631 952 ntBASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 AC092490.3-201ENST00000545370 572 ntBASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.07□□□□□ -1.44
CHMP4CQ96CF2 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms