Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 SSX6-201ENST00000376932 562 ntBASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 RN7SKP62-201ENST00000384539 329 ntBASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 MIR606-201ENST00000384851 96 ntBASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 MIR431-201ENST00000385266 114 ntBASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 PDCL3P5-201ENST00000398028 722 ntBASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 NMD3P2-201ENST00000421815 761 ntBASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 AC114495.1-201ENST00000441274 436 ntBASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 AL034399.1-201ENST00000451535 380 ntBASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 AC010878.1-201ENST00000456500 1047 ntBASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 SNORD19B-201ENST00000459623 84 ntBASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 RN7SL58P-201ENST00000473445 294 ntBASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 AC055855.1-201ENST00000489563 579 ntBASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 MTND6P8-201ENST00000503471 522 ntBASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 HSPD1P15-201ENST00000505573 1122 ntBASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 RNU6-347P-201ENST00000516658 105 ntBASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 TRMT10BP1-201ENST00000519377 943 ntBASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 AC018442.3-201ENST00000523025 183 ntBASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 REG4-204ENST00000530654 612 ntTSL 5 BASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 COX6CP11-201ENST00000555293 229 ntBASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 AC044860.3-201ENST00000559957 368 ntBASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 AC093249.1-201ENST00000567049 203 ntBASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 MIR5095-201ENST00000578844 88 ntBASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 AC006504.6-201ENST00000590142 199 ntBASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 OR7E94P-202ENST00000601375 790 ntBASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 AC068790.3-201ENST00000602988 553 ntBASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 uc_338.12-201ENST00000616344 181 ntBASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 AC243830.2-201ENST00000618067 630 ntBASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 PART1_3.1-201ENST00000619680 131 ntBASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 TEX41-265ENST00000627785 704 ntTSL 5 BASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 AC130650.2-201ENST00000618736 2403 ntBASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 AP003486.1-201ENST00000525716 3994 ntBASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.62□□□□□ -1.35
DEPDC4Q8N2C3 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 MSL3P1-202ENST00000440028 1468 ntBASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 AL391380.1-201ENST00000439300 1432 ntBASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 Y_RNA.128-201ENST00000363391 112 ntBASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 RNU4-48P-201ENST00000365559 182 ntBASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 PPIAP26-201ENST00000377951 522 ntBASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 CD3D-202ENST00000392884 476 ntTSL 2 BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 SNORA3.1-201ENST00000408166 111 ntBASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 RNU6-193P-201ENST00000410977 107 ntBASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 RPL31P45-201ENST00000419532 356 ntBASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 AL590233.1-201ENST00000430017 456 ntBASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 NQO1-204ENST00000439109 924 ntTSL 2 BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 FUNDC2P2-202ENST00000443452 493 ntBASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 AC073415.1-201ENST00000449240 153 ntBASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 AC007547.1-201ENST00000462177 490 ntBASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 RN7SL308P-201ENST00000464971 297 ntBASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 AC015820.1-201ENST00000473882 321 ntBASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 AC087879.1-201ENST00000474343 374 ntBASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 RN7SKP242-201ENST00000515967 289 ntBASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 RNU4-49P-201ENST00000516080 140 ntBASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 RN7SKP256-201ENST00000517201 314 ntBASIC6.61□□□□□ -1.35
DEPDC4Q8N2C3 AP004607.5-201ENST00000532034 217 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms