Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 OR10V3P-201ENST00000525712 725 ntBASIC4.61□□□□□ -1.67
BEST3Q8N1M1 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 NPM1P47-201ENST00000560843 856 ntBASIC4.61□□□□□ -1.67
BEST3Q8N1M1 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 BGLT3-201ENST00000564523 994 ntBASIC4.61□□□□□ -1.67
BEST3Q8N1M1 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 AC087283.1-201ENST00000604029 1074 ntBASIC4.61□□□□□ -1.67
BEST3Q8N1M1 RNU4-5P-201ENST00000607255 135 ntBASIC4.61□□□□□ -1.67
BEST3Q8N1M1 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 PART1_2.1-201ENST00000612397 250 ntBASIC4.61□□□□□ -1.67
BEST3Q8N1M1 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.61□□□□□ -1.67
BEST3Q8N1M1 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 AC004232.3-201ENST00000622977 525 ntBASIC4.61□□□□□ -1.67
BEST3Q8N1M1 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 AC011447.7-201ENST00000624228 1590 ntBASIC4.61□□□□□ -1.67
BEST3Q8N1M1 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 ANKRD36P1-201ENST00000344424 659 ntBASIC4.6□□□□□ -1.67
BEST3Q8N1M1 RNA5SP443-201ENST00000363083 132 ntBASIC4.6□□□□□ -1.67
BEST3Q8N1M1 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 RNU6-549P-201ENST00000384433 107 ntBASIC4.6□□□□□ -1.67
BEST3Q8N1M1 CYB5AP4-201ENST00000396692 399 ntBASIC4.6□□□□□ -1.67
BEST3Q8N1M1 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.6□□□□□ -1.67
BEST3Q8N1M1 Y_RNA.625-201ENST00000411256 107 ntBASIC4.6□□□□□ -1.67
BEST3Q8N1M1 SETP15-201ENST00000412724 337 ntBASIC4.6□□□□□ -1.67
BEST3Q8N1M1 MTND4P3-201ENST00000417829 541 ntBASIC4.6□□□□□ -1.67
BEST3Q8N1M1 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 USP9YP9-201ENST00000429406 715 ntBASIC4.6□□□□□ -1.67
BEST3Q8N1M1 USP9YP24-201ENST00000434374 697 ntBASIC4.6□□□□□ -1.67
BEST3Q8N1M1 ELOCP11-201ENST00000436690 332 ntBASIC4.6□□□□□ -1.67
BEST3Q8N1M1 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 PTGES3P1-201ENST00000439531 483 ntBASIC4.6□□□□□ -1.67
BEST3Q8N1M1 RPS29P9-201ENST00000440360 171 ntBASIC4.6□□□□□ -1.67
BEST3Q8N1M1 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 ELOCP16-201ENST00000444494 332 ntBASIC4.6□□□□□ -1.67
BEST3Q8N1M1 USP9YP17-201ENST00000444617 696 ntBASIC4.6□□□□□ -1.67
BEST3Q8N1M1 EIF2S2P2-201ENST00000447161 982 ntBASIC4.6□□□□□ -1.67
BEST3Q8N1M1 AC022431.1-201ENST00000450941 438 ntBASIC4.6□□□□□ -1.67
BEST3Q8N1M1 AC079203.1-201ENST00000487972 404 ntBASIC4.6□□□□□ -1.67
BEST3Q8N1M1 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 RPL21P131-201ENST00000497298 483 ntBASIC4.6□□□□□ -1.67
BEST3Q8N1M1 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 AC008565.1-201ENST00000509046 885 ntBASIC4.6□□□□□ -1.67
BEST3Q8N1M1 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 RN7SKP265-201ENST00000516448 223 ntBASIC4.6□□□□□ -1.67
BEST3Q8N1M1 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 AC012339.2-201ENST00000523996 453 ntBASIC4.6□□□□□ -1.67
BEST3Q8N1M1 BNIP3P1-201ENST00000547295 580 ntBASIC4.6□□□□□ -1.67
BEST3Q8N1M1 CR383656.6-201ENST00000550518 394 ntBASIC4.6□□□□□ -1.67
BEST3Q8N1M1 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 MIR4737-201ENST00000583979 81 ntBASIC4.6□□□□□ -1.67
BEST3Q8N1M1 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 AL365400.2-201ENST00000605604 902 ntBASIC4.6□□□□□ -1.67
BEST3Q8N1M1 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 AC024060.1-201ENST00000607052 494 ntBASIC4.6□□□□□ -1.67
BEST3Q8N1M1 uc_338.9-201ENST00000617424 182 ntBASIC4.6□□□□□ -1.67
BEST3Q8N1M1 AC097520.1-201ENST00000624435 385 ntBASIC4.6□□□□□ -1.67
BEST3Q8N1M1 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 AC100871.1-201ENST00000507871 1456 ntBASIC4.6□□□□□ -1.67
BEST3Q8N1M1 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
BEST3Q8N1M1 AC099654.2-201ENST00000433031 1980 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms