Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.8□□□□□ -1.48
TMEFF1Q8IYR6 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TMEFF1Q8IYR6 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.8□□□□□ -1.48
TMEFF1Q8IYR6 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TMEFF1Q8IYR6 AC016583.1-201ENST00000624221 2431 ntBASIC5.8□□□□□ -1.48
TMEFF1Q8IYR6 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TMEFF1Q8IYR6 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TMEFF1Q8IYR6 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TMEFF1Q8IYR6 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.8□□□□□ -1.48
TMEFF1Q8IYR6 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TMEFF1Q8IYR6 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.8□□□□□ -1.48
TMEFF1Q8IYR6 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TMEFF1Q8IYR6 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TMEFF1Q8IYR6 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
TMEFF1Q8IYR6 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TMEFF1Q8IYR6 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.8□□□□□ -1.48
TMEFF1Q8IYR6 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
TMEFF1Q8IYR6 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 AL355377.1-201ENST00000621125 1653 ntBASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 AC025470.1-201ENST00000510053 2032 ntBASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 PABPC1P6-201ENST00000445594 1829 ntBASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 ICE2P1-201ENST00000512800 1849 ntBASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 SNORD8-201ENST00000363915 110 ntBASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 Y_RNA.453-201ENST00000384223 109 ntBASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 MT-TD-201ENST00000387419 68 ntBASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 OR2W4P-201ENST00000406496 926 ntBASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 RN7SKP56-201ENST00000410513 331 ntBASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 RPL21P32-201ENST00000419877 477 ntBASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 AC006065.1-201ENST00000422539 802 ntBASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 AC233728.2-201ENST00000425348 757 ntBASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 Z99127.3-201ENST00000448158 395 ntBASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 AC079776.3-201ENST00000450665 370 ntBASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 RANP1-206ENST00000455094 651 ntBASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 ACA64.4-201ENST00000459070 127 ntBASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 AC115223.1-201ENST00000466377 870 ntBASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 MTND6P6-201ENST00000478031 263 ntBASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 RN7SL727P-201ENST00000482164 296 ntBASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 AC009120.1-201ENST00000493458 473 ntBASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 AC105252.1-201ENST00000503089 286 ntBASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 ARL2BPP6-201ENST00000512757 439 ntBASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 AC006960.3-201ENST00000561845 705 ntBASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 AC018558.5-201ENST00000565840 952 ntBASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 AC091489.2-201ENST00000566263 604 ntBASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 BPTFP1-201ENST00000579209 492 ntBASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 UBE2Q2P2-203ENST00000613592 761 ntBASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 AC002553.4-201ENST00000616896 331 ntBASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 MIR8080-201ENST00000622224 89 ntBASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 RPL23AP61-201ENST00000623642 466 ntBASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
TMEFF1Q8IYR6 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.78□□□□□ -1.48
TMEFF1Q8IYR6 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TMEFF1Q8IYR6 KCNMB3P1-202ENST00000493696 3389 ntBASIC5.78□□□□□ -1.48
TMEFF1Q8IYR6 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TMEFF1Q8IYR6 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TMEFF1Q8IYR6 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TMEFF1Q8IYR6 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms