Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
NPAS4Q8IUM7 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.62□□□□□ -1.35
NPAS4Q8IUM7 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 ANKRD62P1-201ENST00000434304 1623 ntBASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 PDZK1P1-202ENST00000425209 1350 ntBASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 MTND4P23-201ENST00000447723 1363 ntBASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 FUNDC2P3-201ENST00000334716 533 ntBASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 RNU6-249P-201ENST00000363016 102 ntBASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 RNU1-146P-201ENST00000364015 165 ntBASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 RNU6-259P-201ENST00000383999 107 ntBASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 RNU6-348P-201ENST00000384386 107 ntBASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 U3.25-201ENST00000391209 220 ntBASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 RN7SKP293-201ENST00000411389 296 ntBASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 USP9YP13-201ENST00000417797 480 ntBASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 AC092967.1-201ENST00000449016 481 ntBASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 AL033528.1-201ENST00000453780 140 ntBASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 SNORD42A-201ENST00000459584 64 ntBASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 RPL7AP10-201ENST00000481016 791 ntBASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 RPS4XP14-201ENST00000493072 781 ntBASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 RNU6-528P-201ENST00000516926 100 ntBASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 CASC19-203ENST00000523510 575 ntTSL 3 BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 AP000790.1-201ENST00000528891 737 ntBASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 ZNF519P2-201ENST00000557032 169 ntBASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 SNORA59B-202ENST00000578183 701 ntBASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 MIR5095-201ENST00000578844 88 ntBASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 BNIP3P8-201ENST00000597863 560 ntBASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 AC112230.1-201ENST00000604342 547 ntBASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 AC004067.1-201ENST00000608733 700 ntBASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 AC103710.4-201ENST00000609301 899 ntBASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 RN7SL787P-201ENST00000613000 284 ntBASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 AL512624.1-201ENST00000613638 469 ntBASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 AC022467.1-201ENST00000614738 749 ntBASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 AL357080.1-201ENST00000617394 239 ntBASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 AC072046.2-201ENST00000618366 268 ntBASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 AC013488.1-201ENST00000526618 1838 ntBASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 AP000866.6-201ENST00000638898 3579 ntBASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NPAS4Q8IUM7 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NPAS4Q8IUM7 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
NPAS4Q8IUM7 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NPAS4Q8IUM7 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NPAS4Q8IUM7 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NPAS4Q8IUM7 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NPAS4Q8IUM7 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
NPAS4Q8IUM7 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NPAS4Q8IUM7 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
NPAS4Q8IUM7 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
NPAS4Q8IUM7 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.6□□□□□ -1.35
NPAS4Q8IUM7 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NPAS4Q8IUM7 MIR433-201ENST00000384837 93 ntBASIC6.6□□□□□ -1.35
NPAS4Q8IUM7 MIR649-201ENST00000384843 97 ntBASIC6.6□□□□□ -1.35
NPAS4Q8IUM7 MIR640-201ENST00000385086 96 ntBASIC6.6□□□□□ -1.35
NPAS4Q8IUM7 AL390316.1-201ENST00000406279 553 ntBASIC6.6□□□□□ -1.35
NPAS4Q8IUM7 Y_RNA.598-201ENST00000410480 95 ntBASIC6.6□□□□□ -1.35
NPAS4Q8IUM7 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.6□□□□□ -1.35
NPAS4Q8IUM7 RPL35AP3-201ENST00000414680 288 ntBASIC6.6□□□□□ -1.35
NPAS4Q8IUM7 AC016769.2-201ENST00000414815 475 ntBASIC6.6□□□□□ -1.35
NPAS4Q8IUM7 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.6□□□□□ -1.35
NPAS4Q8IUM7 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC6.6□□□□□ -1.35
NPAS4Q8IUM7 AC009302.1-201ENST00000417147 390 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms