Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 RPL35AP28-201ENST00000459730 331 ntBASIC4.2□□□□□ -1.74
NIPAL3Q6P499 RPS20P4-201ENST00000461659 355 ntBASIC4.2□□□□□ -1.74
NIPAL3Q6P499 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NIPAL3Q6P499 AC108022.1-201ENST00000493466 478 ntBASIC4.2□□□□□ -1.74
NIPAL3Q6P499 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.2□□□□□ -1.74
NIPAL3Q6P499 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NIPAL3Q6P499 OR7H2P-201ENST00000513483 306 ntBASIC4.2□□□□□ -1.74
NIPAL3Q6P499 RNA5SP446-201ENST00000515955 82 ntBASIC4.2□□□□□ -1.74
NIPAL3Q6P499 SNORD116-26-201ENST00000516006 96 ntBASIC4.2□□□□□ -1.74
NIPAL3Q6P499 SNORA31.13-201ENST00000516624 135 ntBASIC4.2□□□□□ -1.74
NIPAL3Q6P499 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
NIPAL3Q6P499 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.2□□□□□ -1.74
NIPAL3Q6P499 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.2□□□□□ -1.74
NIPAL3Q6P499 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.2□□□□□ -1.74
NIPAL3Q6P499 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.2□□□□□ -1.74
NIPAL3Q6P499 HMGB3P26-201ENST00000560051 582 ntBASIC4.2□□□□□ -1.74
NIPAL3Q6P499 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.2□□□□□ -1.74
NIPAL3Q6P499 AC091042.1-201ENST00000579213 173 ntBASIC4.2□□□□□ -1.74
NIPAL3Q6P499 AC007448.1-201ENST00000582714 234 ntBASIC4.2□□□□□ -1.74
NIPAL3Q6P499 MIR4512-201ENST00000583257 77 ntBASIC4.2□□□□□ -1.74
NIPAL3Q6P499 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.2□□□□□ -1.74
NIPAL3Q6P499 MIR4737-201ENST00000583979 81 ntBASIC4.2□□□□□ -1.74
NIPAL3Q6P499 AC115085.1-201ENST00000588924 229 ntBASIC4.2□□□□□ -1.74
NIPAL3Q6P499 SLC25A36P1-201ENST00000590111 465 ntBASIC4.2□□□□□ -1.74
NIPAL3Q6P499 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.2□□□□□ -1.74
NIPAL3Q6P499 AC040174.2-201ENST00000602701 465 ntBASIC4.2□□□□□ -1.74
NIPAL3Q6P499 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.2□□□□□ -1.74
NIPAL3Q6P499 AL391358.1-201ENST00000605342 190 ntBASIC4.2□□□□□ -1.74
NIPAL3Q6P499 AC024940.4-201ENST00000605507 246 ntBASIC4.2□□□□□ -1.74
NIPAL3Q6P499 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.2□□□□□ -1.74
NIPAL3Q6P499 Mico1.1-201ENST00000611698 204 ntBASIC4.2□□□□□ -1.74
NIPAL3Q6P499 AL049539.1-201ENST00000611964 459 ntBASIC4.2□□□□□ -1.74
NIPAL3Q6P499 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.2□□□□□ -1.74
NIPAL3Q6P499 AL354696.1-201ENST00000614652 497 ntBASIC4.2□□□□□ -1.74
NIPAL3Q6P499 MIR6853-201ENST00000619642 74 ntBASIC4.2□□□□□ -1.74
NIPAL3Q6P499 AC090617.9-201ENST00000623751 147 ntBASIC4.2□□□□□ -1.74
NIPAL3Q6P499 AP001784.1-201ENST00000624107 428 ntBASIC4.2□□□□□ -1.74
NIPAL3Q6P499 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.2□□□□□ -1.74
NIPAL3Q6P499 CFTRP2-201ENST00000634304 199 ntBASIC4.2□□□□□ -1.74
NIPAL3Q6P499 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.2□□□□□ -1.74
NIPAL3Q6P499 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.2□□□□□ -1.74
NIPAL3Q6P499 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.2□□□□□ -1.74
NIPAL3Q6P499 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NIPAL3Q6P499 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
NIPAL3Q6P499 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NIPAL3Q6P499 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.2□□□□□ -1.74
NIPAL3Q6P499 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NIPAL3Q6P499 Z95327.2-201ENST00000414579 1873 ntBASIC4.2□□□□□ -1.74
NIPAL3Q6P499 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.2□□□□□ -1.74
NIPAL3Q6P499 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NIPAL3Q6P499 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NIPAL3Q6P499 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.19□□□□□ -1.74
NIPAL3Q6P499 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NIPAL3Q6P499 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NIPAL3Q6P499 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.19□□□□□ -1.74
NIPAL3Q6P499 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.19□□□□□ -1.74
NIPAL3Q6P499 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NIPAL3Q6P499 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NIPAL3Q6P499 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NIPAL3Q6P499 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.19□□□□□ -1.74
NIPAL3Q6P499 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
NIPAL3Q6P499 HMGB1P10-201ENST00000395823 563 ntBASIC4.19□□□□□ -1.74
NIPAL3Q6P499 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.19□□□□□ -1.74
NIPAL3Q6P499 RN7SKP100-201ENST00000411258 284 ntBASIC4.19□□□□□ -1.74
NIPAL3Q6P499 OR51B3P-201ENST00000412287 913 ntBASIC4.19□□□□□ -1.74
NIPAL3Q6P499 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.19□□□□□ -1.74
NIPAL3Q6P499 BX510359.2-201ENST00000417920 305 ntBASIC4.19□□□□□ -1.74
NIPAL3Q6P499 FAR1P1-201ENST00000427163 934 ntBASIC4.19□□□□□ -1.74
NIPAL3Q6P499 AL360081.1-201ENST00000428299 555 ntBASIC4.19□□□□□ -1.74
NIPAL3Q6P499 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.19□□□□□ -1.74
NIPAL3Q6P499 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.19□□□□□ -1.74
NIPAL3Q6P499 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.19□□□□□ -1.74
NIPAL3Q6P499 AC016831.4-201ENST00000438302 307 ntBASIC4.19□□□□□ -1.74
NIPAL3Q6P499 AC006466.1-201ENST00000438721 289 ntBASIC4.19□□□□□ -1.74
NIPAL3Q6P499 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.19□□□□□ -1.74
NIPAL3Q6P499 AL513321.1-201ENST00000441175 761 ntBASIC4.19□□□□□ -1.74
NIPAL3Q6P499 AL353093.1-201ENST00000441292 436 ntBASIC4.19□□□□□ -1.74
NIPAL3Q6P499 HMGB3P21-201ENST00000452483 547 ntBASIC4.19□□□□□ -1.74
NIPAL3Q6P499 AC090142.1-201ENST00000465776 462 ntBASIC4.19□□□□□ -1.74
NIPAL3Q6P499 AC011037.1-201ENST00000483964 558 ntBASIC4.19□□□□□ -1.74
NIPAL3Q6P499 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NIPAL3Q6P499 SCARNA22-201ENST00000503991 125 ntBASIC4.19□□□□□ -1.74
NIPAL3Q6P499 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
NIPAL3Q6P499 STMN1P2-201ENST00000508435 439 ntBASIC4.19□□□□□ -1.74
NIPAL3Q6P499 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.19□□□□□ -1.74
NIPAL3Q6P499 RNU2-30P-201ENST00000516209 141 ntBASIC4.19□□□□□ -1.74
NIPAL3Q6P499 AF186190.1-201ENST00000517470 480 ntBASIC4.19□□□□□ -1.74
NIPAL3Q6P499 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.19□□□□□ -1.74
NIPAL3Q6P499 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.19□□□□□ -1.74
NIPAL3Q6P499 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.19□□□□□ -1.74
NIPAL3Q6P499 POLR2KP1-201ENST00000553226 168 ntBASIC4.19□□□□□ -1.74
NIPAL3Q6P499 AL731537.2-201ENST00000561565 951 ntBASIC4.19□□□□□ -1.74
NIPAL3Q6P499 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.19□□□□□ -1.74
NIPAL3Q6P499 HNRNPCP4-201ENST00000571636 900 ntBASIC4.19□□□□□ -1.74
NIPAL3Q6P499 MIR4480-201ENST00000582492 71 ntBASIC4.19□□□□□ -1.74
NIPAL3Q6P499 NF1P5-201ENST00000588287 448 ntBASIC4.19□□□□□ -1.74
NIPAL3Q6P499 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
NIPAL3Q6P499 HMGB2P1-201ENST00000591146 634 ntBASIC4.19□□□□□ -1.74
NIPAL3Q6P499 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.19□□□□□ -1.74
NIPAL3Q6P499 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms