Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC4.05□□□□□ -1.76
RIF1Q5UIP0 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC4.05□□□□□ -1.76
RIF1Q5UIP0 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC4.05□□□□□ -1.76
RIF1Q5UIP0 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.05□□□□□ -1.76
RIF1Q5UIP0 AL590806.1-201ENST00000415818 853 ntBASIC4.05□□□□□ -1.76
RIF1Q5UIP0 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.05□□□□□ -1.76
RIF1Q5UIP0 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.05□□□□□ -1.76
RIF1Q5UIP0 AC010486.1-201ENST00000511793 424 ntBASIC4.05□□□□□ -1.76
RIF1Q5UIP0 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.05□□□□□ -1.76
RIF1Q5UIP0 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.05□□□□□ -1.76
RIF1Q5UIP0 AC107294.1-201ENST00000609524 467 ntBASIC4.05□□□□□ -1.76
RIF1Q5UIP0 Z95327.3-201ENST00000610385 572 ntBASIC4.05□□□□□ -1.76
RIF1Q5UIP0 AC015804.1-201ENST00000622935 435 ntBASIC4.05□□□□□ -1.76
RIF1Q5UIP0 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RIF1Q5UIP0 ZNF402P-201ENST00000404435 3100 ntBASIC4.05□□□□□ -1.76
RIF1Q5UIP0 AP004289.2-201ENST00000444413 1457 ntBASIC4.05□□□□□ -1.76
RIF1Q5UIP0 AC092111.2-201ENST00000611627 1414 ntBASIC4.05□□□□□ -1.76
RIF1Q5UIP0 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RIF1Q5UIP0 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
RIF1Q5UIP0 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RIF1Q5UIP0 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
RIF1Q5UIP0 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
RIF1Q5UIP0 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.05□□□□□ -1.76
RIF1Q5UIP0 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
RIF1Q5UIP0 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC4.04□□□□□ -1.76
RIF1Q5UIP0 AP000473.2-201ENST00000602659 1537 ntBASIC4.04□□□□□ -1.76
RIF1Q5UIP0 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RIF1Q5UIP0 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC4.04□□□□□ -1.76
RIF1Q5UIP0 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RIF1Q5UIP0 OR11H4-201ENST00000315409 1082 ntBASIC4.04□□□□□ -1.76
RIF1Q5UIP0 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RIF1Q5UIP0 AL391219.1-201ENST00000422570 483 ntBASIC4.04□□□□□ -1.76
RIF1Q5UIP0 CYCSP35-201ENST00000451978 304 ntBASIC4.04□□□□□ -1.76
RIF1Q5UIP0 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.04□□□□□ -1.76
RIF1Q5UIP0 AC106707.2-201ENST00000484182 374 ntBASIC4.04□□□□□ -1.76
RIF1Q5UIP0 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.04□□□□□ -1.76
RIF1Q5UIP0 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.04□□□□□ -1.76
RIF1Q5UIP0 SCARNA14-201ENST00000516903 136 ntBASIC4.04□□□□□ -1.76
RIF1Q5UIP0 EIF4BP1-201ENST00000554881 351 ntBASIC4.04□□□□□ -1.76
RIF1Q5UIP0 MIR5684-201ENST00000585074 65 ntBASIC4.04□□□□□ -1.76
RIF1Q5UIP0 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.04□□□□□ -1.76
RIF1Q5UIP0 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.04□□□□□ -1.76
RIF1Q5UIP0 MIR6891-201ENST00000618788 93 ntBASIC4.04□□□□□ -1.76
RIF1Q5UIP0 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
RIF1Q5UIP0 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
RIF1Q5UIP0 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RIF1Q5UIP0 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
RIF1Q5UIP0 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RIF1Q5UIP0 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
RIF1Q5UIP0 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.04□□□□□ -1.76
RIF1Q5UIP0 RNU4-6P-201ENST00000410804 122 ntBASIC4.04□□□□□ -1.76
RIF1Q5UIP0 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.04□□□□□ -1.76
RIF1Q5UIP0 AC069306.1-201ENST00000507006 843 ntBASIC4.04□□□□□ -1.76
RIF1Q5UIP0 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.04□□□□□ -1.76
RIF1Q5UIP0 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
RIF1Q5UIP0 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RIF1Q5UIP0 AC021242.1-201ENST00000507315 2035 ntBASIC4.04□□□□□ -1.76
RIF1Q5UIP0 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RIF1Q5UIP0 AC083899.2-201ENST00000423285 1376 ntBASIC4.04□□□□□ -1.76
RIF1Q5UIP0 TRIM51GP-201ENST00000534741 1350 ntBASIC4.04□□□□□ -1.76
RIF1Q5UIP0 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RIF1Q5UIP0 AC013429.2-201ENST00000418798 781 ntBASIC4.03□□□□□ -1.76
RIF1Q5UIP0 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.03□□□□□ -1.76
RIF1Q5UIP0 AC099670.2-201ENST00000435130 321 ntBASIC4.03□□□□□ -1.76
RIF1Q5UIP0 RN7SL807P-201ENST00000470923 297 ntBASIC4.03□□□□□ -1.76
RIF1Q5UIP0 AF213884.1-201ENST00000488102 463 ntBASIC4.03□□□□□ -1.76
RIF1Q5UIP0 FTH1P24-201ENST00000503502 462 ntBASIC4.03□□□□□ -1.76
RIF1Q5UIP0 HIGD1AP18-201ENST00000520730 278 ntBASIC4.03□□□□□ -1.76
RIF1Q5UIP0 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.03□□□□□ -1.76
RIF1Q5UIP0 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.03□□□□□ -1.76
RIF1Q5UIP0 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.03□□□□□ -1.76
RIF1Q5UIP0 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.03□□□□□ -1.76
RIF1Q5UIP0 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RIF1Q5UIP0 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RIF1Q5UIP0 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
RIF1Q5UIP0 SNORA38.1-201ENST00000364172 131 ntBASIC4.03□□□□□ -1.76
RIF1Q5UIP0 AL031121.1-201ENST00000406553 254 ntBASIC4.03□□□□□ -1.76
RIF1Q5UIP0 AC062016.2-201ENST00000420950 676 ntBASIC4.03□□□□□ -1.76
RIF1Q5UIP0 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.03□□□□□ -1.76
RIF1Q5UIP0 MTCO1P45-201ENST00000431457 267 ntBASIC4.03□□□□□ -1.76
RIF1Q5UIP0 RNA5SP360-201ENST00000516555 118 ntBASIC4.03□□□□□ -1.76
RIF1Q5UIP0 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.03□□□□□ -1.76
RIF1Q5UIP0 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.03□□□□□ -1.76
RIF1Q5UIP0 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.03□□□□□ -1.76
RIF1Q5UIP0 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.03□□□□□ -1.76
RIF1Q5UIP0 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.03□□□□□ -1.76
RIF1Q5UIP0 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.03□□□□□ -1.76
RIF1Q5UIP0 MTCO3P22-201ENST00000603219 784 ntBASIC4.03□□□□□ -1.76
RIF1Q5UIP0 LINC00561-201ENST00000565815 2738 ntBASIC4.03□□□□□ -1.76
RIF1Q5UIP0 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.03□□□□□ -1.76
RIF1Q5UIP0 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RIF1Q5UIP0 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RIF1Q5UIP0 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.03□□□□□ -1.76
RIF1Q5UIP0 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
RIF1Q5UIP0 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.77
RIF1Q5UIP0 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RIF1Q5UIP0 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
RIF1Q5UIP0 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
RIF1Q5UIP0 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
RIF1Q5UIP0 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms