Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AL359922.3-201ENST00000624779 1670 ntBASIC3.64□□□□□ -1.83
LRRK2Q5S007 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
LRRK2Q5S007 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LRRK2Q5S007 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.64□□□□□ -1.83
LRRK2Q5S007 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC3.64□□□□□ -1.83
LRRK2Q5S007 U3.26-201ENST00000391236 204 ntBASIC3.64□□□□□ -1.83
LRRK2Q5S007 RN7SKP182-201ENST00000410772 298 ntBASIC3.64□□□□□ -1.83
LRRK2Q5S007 RNU4-6P-201ENST00000410804 122 ntBASIC3.64□□□□□ -1.83
LRRK2Q5S007 AL590806.1-201ENST00000415818 853 ntBASIC3.64□□□□□ -1.83
LRRK2Q5S007 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.64□□□□□ -1.83
LRRK2Q5S007 RPL21P43-201ENST00000425440 472 ntBASIC3.64□□□□□ -1.83
LRRK2Q5S007 MRPL35P4-201ENST00000453682 566 ntBASIC3.64□□□□□ -1.83
LRRK2Q5S007 RPL23AP81-201ENST00000455252 467 ntBASIC3.64□□□□□ -1.83
LRRK2Q5S007 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC3.64□□□□□ -1.83
LRRK2Q5S007 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.64□□□□□ -1.83
LRRK2Q5S007 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.64□□□□□ -1.83
LRRK2Q5S007 FP325313.1-201ENST00000638228 703 ntBASIC3.64□□□□□ -1.83
LRRK2Q5S007 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LRRK2Q5S007 AC083899.2-201ENST00000423285 1376 ntBASIC3.63□□□□□ -1.83
LRRK2Q5S007 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.63□□□□□ -1.83
LRRK2Q5S007 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LRRK2Q5S007 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
LRRK2Q5S007 AC139769.1-204ENST00000472297 1931 ntBASIC3.63□□□□□ -1.83
LRRK2Q5S007 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
LRRK2Q5S007 AP004289.2-201ENST00000444413 1457 ntBASIC3.63□□□□□ -1.83
LRRK2Q5S007 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LRRK2Q5S007 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
LRRK2Q5S007 VPS35P1-201ENST00000563400 1518 ntBASIC3.63□□□□□ -1.83
LRRK2Q5S007 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LRRK2Q5S007 AC013429.2-201ENST00000418798 781 ntBASIC3.63□□□□□ -1.83
LRRK2Q5S007 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.63□□□□□ -1.83
LRRK2Q5S007 AC012671.1-201ENST00000451912 203 ntBASIC3.63□□□□□ -1.83
LRRK2Q5S007 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.63□□□□□ -1.83
LRRK2Q5S007 HPRT1P2-201ENST00000505250 544 ntBASIC3.63□□□□□ -1.83
LRRK2Q5S007 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.63□□□□□ -1.83
LRRK2Q5S007 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.63□□□□□ -1.83
LRRK2Q5S007 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC3.63□□□□□ -1.83
LRRK2Q5S007 AC090312.1-201ENST00000580637 348 ntBASIC3.63□□□□□ -1.83
LRRK2Q5S007 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC3.63□□□□□ -1.83
LRRK2Q5S007 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.63□□□□□ -1.83
LRRK2Q5S007 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC3.63□□□□□ -1.83
LRRK2Q5S007 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LRRK2Q5S007 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
LRRK2Q5S007 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LRRK2Q5S007 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
LRRK2Q5S007 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC3.63□□□□□ -1.83
LRRK2Q5S007 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.63□□□□□ -1.83
LRRK2Q5S007 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.63□□□□□ -1.83
LRRK2Q5S007 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC3.63□□□□□ -1.83
LRRK2Q5S007 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.63□□□□□ -1.83
LRRK2Q5S007 RN7SL271P-201ENST00000487601 295 ntBASIC3.63□□□□□ -1.83
LRRK2Q5S007 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.63□□□□□ -1.83
LRRK2Q5S007 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC3.63□□□□□ -1.83
LRRK2Q5S007 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.63□□□□□ -1.83
LRRK2Q5S007 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.63□□□□□ -1.83
LRRK2Q5S007 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.63□□□□□ -1.83
LRRK2Q5S007 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.63□□□□□ -1.83
LRRK2Q5S007 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LRRK2Q5S007 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
LRRK2Q5S007 MAPK10-328ENST00000641553 4009 ntBASIC3.62□□□□□ -1.83
LRRK2Q5S007 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
LRRK2Q5S007 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
LRRK2Q5S007 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LRRK2Q5S007 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LRRK2Q5S007 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
LRRK2Q5S007 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.62□□□□□ -1.83
LRRK2Q5S007 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LRRK2Q5S007 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.62□□□□□ -1.83
LRRK2Q5S007 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.62□□□□□ -1.83
LRRK2Q5S007 GNRHR2P1-201ENST00000555315 631 ntBASIC3.62□□□□□ -1.83
LRRK2Q5S007 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.62□□□□□ -1.83
LRRK2Q5S007 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.62□□□□□ -1.83
LRRK2Q5S007 AC025857.2-201ENST00000602711 238 ntBASIC3.62□□□□□ -1.83
LRRK2Q5S007 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.62□□□□□ -1.83
LRRK2Q5S007 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
LRRK2Q5S007 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LRRK2Q5S007 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LRRK2Q5S007 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
LRRK2Q5S007 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LRRK2Q5S007 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LRRK2Q5S007 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LRRK2Q5S007 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LRRK2Q5S007 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC3.62□□□□□ -1.83
LRRK2Q5S007 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.62□□□□□ -1.83
LRRK2Q5S007 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC3.62□□□□□ -1.83
LRRK2Q5S007 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.62□□□□□ -1.83
LRRK2Q5S007 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.62□□□□□ -1.83
LRRK2Q5S007 EIF4BP1-201ENST00000554881 351 ntBASIC3.62□□□□□ -1.83
LRRK2Q5S007 AC091178.1-203ENST00000584586 279 ntBASIC3.62□□□□□ -1.83
LRRK2Q5S007 MIR6852-201ENST00000621699 66 ntBASIC3.62□□□□□ -1.83
LRRK2Q5S007 AF001550.2-201ENST00000636643 217 ntBASIC3.62□□□□□ -1.83
LRRK2Q5S007 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LRRK2Q5S007 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LRRK2Q5S007 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LRRK2Q5S007 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LRRK2Q5S007 AP000473.2-201ENST00000602659 1537 ntBASIC3.61□□□□□ -1.83
LRRK2Q5S007 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LRRK2Q5S007 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LRRK2Q5S007 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
LRRK2Q5S007 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms