Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RFX7Q2KHR2 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RFX7Q2KHR2 RNU1-85P-201ENST00000364127 164 ntBASIC5.09□□□□□ -1.59
RFX7Q2KHR2 RNA5SP283-201ENST00000365604 119 ntBASIC5.09□□□□□ -1.59
RFX7Q2KHR2 AL035696.2-201ENST00000407941 709 ntBASIC5.09□□□□□ -1.59
RFX7Q2KHR2 RPL6P29-201ENST00000414863 865 ntBASIC5.09□□□□□ -1.59
RFX7Q2KHR2 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.09□□□□□ -1.59
RFX7Q2KHR2 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.09□□□□□ -1.59
RFX7Q2KHR2 RPL23AP46-201ENST00000438548 490 ntBASIC5.09□□□□□ -1.59
RFX7Q2KHR2 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.09□□□□□ -1.59
RFX7Q2KHR2 AC034236.1-201ENST00000469891 373 ntBASIC5.09□□□□□ -1.59
RFX7Q2KHR2 RPL21P6-201ENST00000479171 504 ntBASIC5.09□□□□□ -1.59
RFX7Q2KHR2 TPT1P3-201ENST00000492841 512 ntBASIC5.09□□□□□ -1.59
RFX7Q2KHR2 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.09□□□□□ -1.59
RFX7Q2KHR2 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.09□□□□□ -1.59
RFX7Q2KHR2 CCDC58P3-201ENST00000590792 430 ntBASIC5.09□□□□□ -1.59
RFX7Q2KHR2 AC022916.3-201ENST00000592961 742 ntBASIC5.09□□□□□ -1.59
RFX7Q2KHR2 MTCO1P46-201ENST00000451639 1491 ntBASIC5.09□□□□□ -1.59
RFX7Q2KHR2 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
RFX7Q2KHR2 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RFX7Q2KHR2 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
RFX7Q2KHR2 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
RFX7Q2KHR2 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
RFX7Q2KHR2 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.6
RFX7Q2KHR2 OR51C1P-202ENST00000641159 1444 ntBASIC5.09□□□□□ -1.6
RFX7Q2KHR2 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.6
RFX7Q2KHR2 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.08□□□□□ -1.6
RFX7Q2KHR2 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
RFX7Q2KHR2 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RFX7Q2KHR2 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFX7Q2KHR2 RPL21P65-201ENST00000406094 466 ntBASIC5.08□□□□□ -1.6
RFX7Q2KHR2 SETP15-201ENST00000412724 337 ntBASIC5.08□□□□□ -1.6
RFX7Q2KHR2 RPL36AP36-201ENST00000418616 301 ntBASIC5.08□□□□□ -1.6
RFX7Q2KHR2 AL389915.1-201ENST00000422463 466 ntBASIC5.08□□□□□ -1.6
RFX7Q2KHR2 AL117339.2-201ENST00000430475 180 ntBASIC5.08□□□□□ -1.6
RFX7Q2KHR2 HLA-N-201ENST00000437516 135 ntBASIC5.08□□□□□ -1.6
RFX7Q2KHR2 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.08□□□□□ -1.6
RFX7Q2KHR2 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.08□□□□□ -1.6
RFX7Q2KHR2 AC020593.1-201ENST00000507399 299 ntBASIC5.08□□□□□ -1.6
RFX7Q2KHR2 MED28P5-201ENST00000528254 438 ntBASIC5.08□□□□□ -1.6
RFX7Q2KHR2 GLRXP2-201ENST00000555594 321 ntBASIC5.08□□□□□ -1.6
RFX7Q2KHR2 TVP23BP1-201ENST00000557500 617 ntBASIC5.08□□□□□ -1.6
RFX7Q2KHR2 AC006130.2-201ENST00000586202 326 ntBASIC5.08□□□□□ -1.6
RFX7Q2KHR2 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.08□□□□□ -1.6
RFX7Q2KHR2 AC099676.1-201ENST00000608886 657 ntBASIC5.08□□□□□ -1.6
RFX7Q2KHR2 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.08□□□□□ -1.6
RFX7Q2KHR2 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFX7Q2KHR2 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RFX7Q2KHR2 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RFX7Q2KHR2 AC021242.1-201ENST00000507315 2035 ntBASIC5.08□□□□□ -1.6
RFX7Q2KHR2 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.08□□□□□ -1.6
RFX7Q2KHR2 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.08□□□□□ -1.6
RFX7Q2KHR2 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFX7Q2KHR2 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFX7Q2KHR2 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
RFX7Q2KHR2 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RFX7Q2KHR2 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
RFX7Q2KHR2 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFX7Q2KHR2 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFX7Q2KHR2 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFX7Q2KHR2 AL445189.1-201ENST00000405722 338 ntBASIC5.07□□□□□ -1.6
RFX7Q2KHR2 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.07□□□□□ -1.6
RFX7Q2KHR2 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.07□□□□□ -1.6
RFX7Q2KHR2 AC006326.1-201ENST00000445465 787 ntBASIC5.07□□□□□ -1.6
RFX7Q2KHR2 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.07□□□□□ -1.6
RFX7Q2KHR2 RPS29P19-201ENST00000479709 171 ntBASIC5.07□□□□□ -1.6
RFX7Q2KHR2 AC006517.1-201ENST00000480485 328 ntBASIC5.07□□□□□ -1.6
RFX7Q2KHR2 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.07□□□□□ -1.6
RFX7Q2KHR2 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.07□□□□□ -1.6
RFX7Q2KHR2 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.07□□□□□ -1.6
RFX7Q2KHR2 AC027176.2-201ENST00000559166 746 ntBASIC5.07□□□□□ -1.6
RFX7Q2KHR2 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.07□□□□□ -1.6
RFX7Q2KHR2 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.07□□□□□ -1.6
RFX7Q2KHR2 AP005264.7-201ENST00000625003 745 ntBASIC5.07□□□□□ -1.6
RFX7Q2KHR2 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.07□□□□□ -1.6
RFX7Q2KHR2 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.07□□□□□ -1.6
RFX7Q2KHR2 AC027228.2-201ENST00000567141 2154 ntBASIC5.07□□□□□ -1.6
RFX7Q2KHR2 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.07□□□□□ -1.6
RFX7Q2KHR2 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.07□□□□□ -1.6
RFX7Q2KHR2 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFX7Q2KHR2 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFX7Q2KHR2 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFX7Q2KHR2 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFX7Q2KHR2 AC097504.1-201ENST00000515103 2415 ntBASIC5.07□□□□□ -1.6
RFX7Q2KHR2 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFX7Q2KHR2 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFX7Q2KHR2 RN7SKP224-201ENST00000364140 325 ntBASIC5.06□□□□□ -1.6
RFX7Q2KHR2 AL607077.1-201ENST00000401718 499 ntBASIC5.06□□□□□ -1.6
RFX7Q2KHR2 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.06□□□□□ -1.6
RFX7Q2KHR2 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.06□□□□□ -1.6
RFX7Q2KHR2 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.06□□□□□ -1.6
RFX7Q2KHR2 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.06□□□□□ -1.6
RFX7Q2KHR2 VN1R105P-201ENST00000486595 910 ntBASIC5.06□□□□□ -1.6
RFX7Q2KHR2 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RFX7Q2KHR2 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.06□□□□□ -1.6
RFX7Q2KHR2 FTH1P21-201ENST00000512179 511 ntBASIC5.06□□□□□ -1.6
RFX7Q2KHR2 KCTD9P2-201ENST00000512203 1013 ntBASIC5.06□□□□□ -1.6
RFX7Q2KHR2 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.06□□□□□ -1.6
RFX7Q2KHR2 DYNLL1P4-201ENST00000549314 266 ntBASIC5.06□□□□□ -1.6
RFX7Q2KHR2 AC063950.1-201ENST00000552036 308 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms