Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.03□□□□□ -1.6
GABPAQ06546 NEAT1-202ENST00000501122 22743 ntBASIC5.03□□□□□ -1.6
GABPAQ06546 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
GABPAQ06546 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.03□□□□□ -1.6
GABPAQ06546 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
GABPAQ06546 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
GABPAQ06546 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
GABPAQ06546 MIR7-1-201ENST00000384871 110 ntBASIC5.03□□□□□ -1.6
GABPAQ06546 SNORD66.1-201ENST00000391230 76 ntBASIC5.03□□□□□ -1.6
GABPAQ06546 RN7SKP182-201ENST00000410772 298 ntBASIC5.03□□□□□ -1.6
GABPAQ06546 EIF4A1P3-201ENST00000411521 244 ntBASIC5.03□□□□□ -1.6
GABPAQ06546 PTP4A1P1-201ENST00000420539 515 ntBASIC5.03□□□□□ -1.6
GABPAQ06546 HSFY6P-201ENST00000445573 403 ntBASIC5.03□□□□□ -1.6
GABPAQ06546 RPS4XP12-201ENST00000461747 709 ntBASIC5.03□□□□□ -1.6
GABPAQ06546 AC108022.1-201ENST00000493466 478 ntBASIC5.03□□□□□ -1.6
GABPAQ06546 AC104164.2-201ENST00000496953 495 ntBASIC5.03□□□□□ -1.6
GABPAQ06546 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.03□□□□□ -1.6
GABPAQ06546 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.03□□□□□ -1.6
GABPAQ06546 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.03□□□□□ -1.6
GABPAQ06546 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.03□□□□□ -1.6
GABPAQ06546 RNU6-513P-201ENST00000516104 104 ntBASIC5.03□□□□□ -1.6
GABPAQ06546 RNU6-362P-201ENST00000516736 90 ntBASIC5.03□□□□□ -1.6
GABPAQ06546 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.03□□□□□ -1.6
GABPAQ06546 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.03□□□□□ -1.6
GABPAQ06546 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.03□□□□□ -1.6
GABPAQ06546 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.03□□□□□ -1.6
GABPAQ06546 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.03□□□□□ -1.6
GABPAQ06546 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.03□□□□□ -1.6
GABPAQ06546 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.03□□□□□ -1.6
GABPAQ06546 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.03□□□□□ -1.6
GABPAQ06546 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.03□□□□□ -1.6
GABPAQ06546 VN1R85P-201ENST00000601587 426 ntBASIC5.03□□□□□ -1.6
GABPAQ06546 AC012213.4-201ENST00000606457 354 ntBASIC5.03□□□□□ -1.6
GABPAQ06546 AC090948.2-201ENST00000607363 564 ntBASIC5.03□□□□□ -1.6
GABPAQ06546 AL451049.1-201ENST00000608672 497 ntBASIC5.03□□□□□ -1.6
GABPAQ06546 AL122125.1-201ENST00000616999 600 ntBASIC5.03□□□□□ -1.6
GABPAQ06546 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.03□□□□□ -1.6
GABPAQ06546 AC022106.2-201ENST00000620114 757 ntBASIC5.03□□□□□ -1.6
GABPAQ06546 AC015722.2-201ENST00000622210 551 ntBASIC5.03□□□□□ -1.6
GABPAQ06546 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.03□□□□□ -1.6
GABPAQ06546 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
GABPAQ06546 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
GABPAQ06546 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
GABPAQ06546 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
GABPAQ06546 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.03□□□□□ -1.6
GABPAQ06546 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
GABPAQ06546 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.03□□□□□ -1.6
GABPAQ06546 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.03□□□□□ -1.6
GABPAQ06546 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.03□□□□□ -1.6
GABPAQ06546 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
GABPAQ06546 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
GABPAQ06546 AC105074.1-201ENST00000623380 3095 ntBASIC5.02□□□□□ -1.61
GABPAQ06546 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.02□□□□□ -1.61
GABPAQ06546 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.02□□□□□ -1.61
GABPAQ06546 MIR372-201ENST00000362225 67 ntBASIC5.02□□□□□ -1.61
GABPAQ06546 RN7SKP280-201ENST00000364196 304 ntBASIC5.02□□□□□ -1.61
GABPAQ06546 PPIAP31-201ENST00000405422 495 ntBASIC5.02□□□□□ -1.61
GABPAQ06546 MTND3P20-201ENST00000407663 186 ntBASIC5.02□□□□□ -1.61
GABPAQ06546 AL590806.1-201ENST00000415818 853 ntBASIC5.02□□□□□ -1.61
GABPAQ06546 EIF1P3-201ENST00000423841 334 ntBASIC5.02□□□□□ -1.61
GABPAQ06546 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.02□□□□□ -1.61
GABPAQ06546 AL138787.1-202ENST00000437804 898 ntBASIC5.02□□□□□ -1.61
GABPAQ06546 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.02□□□□□ -1.61
GABPAQ06546 MTND3P4-201ENST00000453537 303 ntBASIC5.02□□□□□ -1.61
GABPAQ06546 RPL5P32-201ENST00000454085 879 ntBASIC5.02□□□□□ -1.61
GABPAQ06546 RNA5SP246-201ENST00000458909 119 ntBASIC5.02□□□□□ -1.61
GABPAQ06546 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
GABPAQ06546 RPL23AP65-201ENST00000475608 468 ntBASIC5.02□□□□□ -1.61
GABPAQ06546 AC108064.1-201ENST00000513791 460 ntBASIC5.02□□□□□ -1.61
GABPAQ06546 MIR2116-201ENST00000517221 80 ntBASIC5.02□□□□□ -1.61
GABPAQ06546 AC104997.1-201ENST00000519761 717 ntBASIC5.02□□□□□ -1.61
GABPAQ06546 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.02□□□□□ -1.61
GABPAQ06546 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.02□□□□□ -1.61
GABPAQ06546 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.02□□□□□ -1.61
GABPAQ06546 AL109618.2-201ENST00000605527 211 ntBASIC5.02□□□□□ -1.61
GABPAQ06546 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.02□□□□□ -1.61
GABPAQ06546 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.02□□□□□ -1.61
GABPAQ06546 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
GABPAQ06546 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
GABPAQ06546 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
GABPAQ06546 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
GABPAQ06546 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
GABPAQ06546 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.02□□□□□ -1.61
GABPAQ06546 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
GABPAQ06546 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
GABPAQ06546 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
GABPAQ06546 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.01□□□□□ -1.61
GABPAQ06546 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
GABPAQ06546 SNORA37-201ENST00000384504 129 ntBASIC5.01□□□□□ -1.61
GABPAQ06546 MIR1271-201ENST00000408537 86 ntBASIC5.01□□□□□ -1.61
GABPAQ06546 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.01□□□□□ -1.61
GABPAQ06546 RNU2-22P-201ENST00000411266 212 ntBASIC5.01□□□□□ -1.61
GABPAQ06546 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.01□□□□□ -1.61
GABPAQ06546 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
GABPAQ06546 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
GABPAQ06546 MRPL50P1-201ENST00000431951 384 ntBASIC5.01□□□□□ -1.61
GABPAQ06546 RPL34P6-201ENST00000432390 345 ntBASIC5.01□□□□□ -1.61
GABPAQ06546 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.01□□□□□ -1.61
GABPAQ06546 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.01□□□□□ -1.61
GABPAQ06546 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms