Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDK3Q00526 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.65□□□□□ -1.67
CDK3Q00526 AC119751.4-201ENST00000507498 357 ntBASIC4.65□□□□□ -1.67
CDK3Q00526 RNA5SP249-201ENST00000516127 99 ntBASIC4.65□□□□□ -1.67
CDK3Q00526 AC079075.1-201ENST00000559543 878 ntBASIC4.65□□□□□ -1.67
CDK3Q00526 AC087477.6-201ENST00000559595 843 ntBASIC4.65□□□□□ -1.67
CDK3Q00526 AC090666.1-201ENST00000578241 445 ntBASIC4.65□□□□□ -1.67
CDK3Q00526 MIR4472-2-201ENST00000582069 67 ntBASIC4.65□□□□□ -1.67
CDK3Q00526 AL158050.2-201ENST00000605336 568 ntBASIC4.65□□□□□ -1.67
CDK3Q00526 AC073569.3-201ENST00000619055 682 ntBASIC4.65□□□□□ -1.67
CDK3Q00526 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.65□□□□□ -1.67
CDK3Q00526 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.65□□□□□ -1.67
CDK3Q00526 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
CDK3Q00526 NEAT1-202ENST00000501122 22743 ntBASIC4.65□□□□□ -1.67
CDK3Q00526 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
CDK3Q00526 DHX40P1-201ENST00000588725 1412 ntBASIC4.64□□□□□ -1.67
CDK3Q00526 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
CDK3Q00526 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDK3Q00526 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDK3Q00526 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDK3Q00526 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDK3Q00526 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CDK3Q00526 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDK3Q00526 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDK3Q00526 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.64□□□□□ -1.67
CDK3Q00526 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDK3Q00526 OR4K15-201ENST00000305051 1216 ntBASIC4.64□□□□□ -1.67
CDK3Q00526 RNU6-98P-201ENST00000384173 107 ntBASIC4.64□□□□□ -1.67
CDK3Q00526 RNA5SP332-201ENST00000391063 115 ntBASIC4.64□□□□□ -1.67
CDK3Q00526 RPS3AP23-201ENST00000401762 784 ntBASIC4.64□□□□□ -1.67
CDK3Q00526 AC233289.1-201ENST00000403700 508 ntBASIC4.64□□□□□ -1.67
CDK3Q00526 Y_RNA.625-201ENST00000411256 107 ntBASIC4.64□□□□□ -1.67
CDK3Q00526 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.64□□□□□ -1.67
CDK3Q00526 AL807761.1-201ENST00000417622 171 ntBASIC4.64□□□□□ -1.67
CDK3Q00526 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.64□□□□□ -1.67
CDK3Q00526 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.64□□□□□ -1.67
CDK3Q00526 EIF4HP2-201ENST00000424380 563 ntBASIC4.64□□□□□ -1.67
CDK3Q00526 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.64□□□□□ -1.67
CDK3Q00526 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.64□□□□□ -1.67
CDK3Q00526 ARL5AP2-201ENST00000444698 533 ntBASIC4.64□□□□□ -1.67
CDK3Q00526 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.64□□□□□ -1.67
CDK3Q00526 AC108463.1-201ENST00000450258 347 ntBASIC4.64□□□□□ -1.67
CDK3Q00526 AC090142.1-201ENST00000465776 462 ntBASIC4.64□□□□□ -1.67
CDK3Q00526 RPL23AP12-201ENST00000467573 473 ntBASIC4.64□□□□□ -1.67
CDK3Q00526 RPL36AP41-201ENST00000493820 306 ntBASIC4.64□□□□□ -1.67
CDK3Q00526 AC025164.1-201ENST00000496249 478 ntBASIC4.64□□□□□ -1.67
CDK3Q00526 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.64□□□□□ -1.67
CDK3Q00526 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.64□□□□□ -1.67
CDK3Q00526 AC093720.1-201ENST00000505681 714 ntBASIC4.64□□□□□ -1.67
CDK3Q00526 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.64□□□□□ -1.67
CDK3Q00526 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.64□□□□□ -1.67
CDK3Q00526 AP002812.4-201ENST00000532139 286 ntBASIC4.64□□□□□ -1.67
CDK3Q00526 AC068714.1-201ENST00000559623 800 ntBASIC4.64□□□□□ -1.67
CDK3Q00526 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.64□□□□□ -1.67
CDK3Q00526 AP005262.1-201ENST00000582646 997 ntBASIC4.64□□□□□ -1.67
CDK3Q00526 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.64□□□□□ -1.67
CDK3Q00526 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.64□□□□□ -1.67
CDK3Q00526 AC008507.2-201ENST00000588402 1176 ntBASIC4.64□□□□□ -1.67
CDK3Q00526 AP003117.1-201ENST00000602771 554 ntBASIC4.64□□□□□ -1.67
CDK3Q00526 MIR7973-1-201ENST00000614683 76 ntBASIC4.64□□□□□ -1.67
CDK3Q00526 BNIP3P41-202ENST00000616656 861 ntBASIC4.64□□□□□ -1.67
CDK3Q00526 AL669942.2-201ENST00000620352 697 ntBASIC4.64□□□□□ -1.67
CDK3Q00526 AC007275.1-201ENST00000621243 671 ntBASIC4.64□□□□□ -1.67
CDK3Q00526 AC015726.3-201ENST00000624501 418 ntBASIC4.64□□□□□ -1.67
CDK3Q00526 AL356118.1-201ENST00000635272 1078 ntBASIC4.64□□□□□ -1.67
CDK3Q00526 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CDK3Q00526 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDK3Q00526 AL136164.3-201ENST00000624429 3978 ntBASIC4.64□□□□□ -1.67
CDK3Q00526 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.64□□□□□ -1.67
CDK3Q00526 CASC19-261ENST00000641853 1638 ntBASIC4.64□□□□□ -1.67
CDK3Q00526 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDK3Q00526 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDK3Q00526 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.64□□□□□ -1.67
CDK3Q00526 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CDK3Q00526 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.63□□□□□ -1.67
CDK3Q00526 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.63□□□□□ -1.67
CDK3Q00526 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
CDK3Q00526 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDK3Q00526 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CDK3Q00526 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CDK3Q00526 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CDK3Q00526 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.63□□□□□ -1.67
CDK3Q00526 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.63□□□□□ -1.67
CDK3Q00526 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CDK3Q00526 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDK3Q00526 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDK3Q00526 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDK3Q00526 SNORD113.2-201ENST00000364166 89 ntBASIC4.63□□□□□ -1.67
CDK3Q00526 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CDK3Q00526 RNU6-207P-201ENST00000384137 107 ntBASIC4.63□□□□□ -1.67
CDK3Q00526 RNU6-1257P-201ENST00000384625 110 ntBASIC4.63□□□□□ -1.67
CDK3Q00526 RNA5SP397-201ENST00000391323 118 ntBASIC4.63□□□□□ -1.67
CDK3Q00526 GLULP6-201ENST00000399502 913 ntBASIC4.63□□□□□ -1.67
CDK3Q00526 RSL24D1P1-201ENST00000404972 493 ntBASIC4.63□□□□□ -1.67
CDK3Q00526 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CDK3Q00526 SETP15-201ENST00000412724 337 ntBASIC4.63□□□□□ -1.67
CDK3Q00526 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.63□□□□□ -1.67
CDK3Q00526 CKS1BP6-201ENST00000424932 240 ntBASIC4.63□□□□□ -1.67
CDK3Q00526 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.63□□□□□ -1.67
CDK3Q00526 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 243.3 ms