Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.16□□□□□ -1.74
LIM2P55344 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.16□□□□□ -1.74
LIM2P55344 AC139713.2-214ENST00000642059 1811 ntBASIC4.16□□□□□ -1.74
LIM2P55344 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
LIM2P55344 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.15□□□□□ -1.74
LIM2P55344 HSPA8P17-201ENST00000427029 1382 ntBASIC4.15□□□□□ -1.74
LIM2P55344 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.15□□□□□ -1.74
LIM2P55344 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.15□□□□□ -1.74
LIM2P55344 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LIM2P55344 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
LIM2P55344 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LIM2P55344 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
LIM2P55344 DDX6P1-205ENST00000441966 1436 ntBASIC4.15□□□□□ -1.74
LIM2P55344 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
LIM2P55344 SNORD51.1-201ENST00000365405 77 ntBASIC4.15□□□□□ -1.75
LIM2P55344 RNU6-31P-201ENST00000384388 108 ntBASIC4.15□□□□□ -1.75
LIM2P55344 AL590806.1-201ENST00000415818 853 ntBASIC4.15□□□□□ -1.75
LIM2P55344 CYCSP10-201ENST00000417973 294 ntBASIC4.15□□□□□ -1.75
LIM2P55344 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.15□□□□□ -1.75
LIM2P55344 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.15□□□□□ -1.75
LIM2P55344 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.15□□□□□ -1.75
LIM2P55344 RPEP2-201ENST00000432149 701 ntBASIC4.15□□□□□ -1.75
LIM2P55344 AC011998.1-201ENST00000433403 117 ntBASIC4.15□□□□□ -1.75
LIM2P55344 ZFAND6P1-201ENST00000434138 605 ntBASIC4.15□□□□□ -1.75
LIM2P55344 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.15□□□□□ -1.75
LIM2P55344 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.15□□□□□ -1.75
LIM2P55344 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.15□□□□□ -1.75
LIM2P55344 AL353898.1-201ENST00000444055 238 ntBASIC4.15□□□□□ -1.75
LIM2P55344 CYCSP42-201ENST00000450823 238 ntBASIC4.15□□□□□ -1.75
LIM2P55344 AC002553.2-201ENST00000453217 340 ntBASIC4.15□□□□□ -1.75
LIM2P55344 Z95152.1-201ENST00000453556 656 ntBASIC4.15□□□□□ -1.75
LIM2P55344 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.15□□□□□ -1.75
LIM2P55344 AC092691.2-201ENST00000461787 803 ntBASIC4.15□□□□□ -1.75
LIM2P55344 RN7SL812P-201ENST00000493791 279 ntBASIC4.15□□□□□ -1.75
LIM2P55344 GLRXP2-201ENST00000555594 321 ntBASIC4.15□□□□□ -1.75
LIM2P55344 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.15□□□□□ -1.75
LIM2P55344 MTND6P33-201ENST00000571794 183 ntBASIC4.15□□□□□ -1.75
LIM2P55344 AC006272.2-201ENST00000594725 163 ntBASIC4.15□□□□□ -1.75
LIM2P55344 AL138721.1-201ENST00000616756 179 ntBASIC4.15□□□□□ -1.75
LIM2P55344 AL669942.2-201ENST00000620352 697 ntBASIC4.15□□□□□ -1.75
LIM2P55344 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.15□□□□□ -1.75
LIM2P55344 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LIM2P55344 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LIM2P55344 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.15□□□□□ -1.75
LIM2P55344 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LIM2P55344 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
LIM2P55344 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
LIM2P55344 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LIM2P55344 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
LIM2P55344 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
LIM2P55344 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LIM2P55344 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LIM2P55344 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LIM2P55344 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LIM2P55344 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
LIM2P55344 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
LIM2P55344 IGKV7-3-201ENST00000357453 298 ntBASIC4.14□□□□□ -1.75
LIM2P55344 MIR331-201ENST00000362302 94 ntBASIC4.14□□□□□ -1.75
LIM2P55344 RNU1-108P-201ENST00000362556 161 ntBASIC4.14□□□□□ -1.75
LIM2P55344 AL358176.3-201ENST00000420757 454 ntBASIC4.14□□□□□ -1.75
LIM2P55344 AC009480.2-201ENST00000422916 432 ntBASIC4.14□□□□□ -1.75
LIM2P55344 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.14□□□□□ -1.75
LIM2P55344 RPL7P33-201ENST00000444159 742 ntBASIC4.14□□□□□ -1.75
LIM2P55344 PHBP16-201ENST00000446318 950 ntBASIC4.14□□□□□ -1.75
LIM2P55344 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.14□□□□□ -1.75
LIM2P55344 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.14□□□□□ -1.75
LIM2P55344 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.14□□□□□ -1.75
LIM2P55344 RPS26P28-201ENST00000470806 348 ntBASIC4.14□□□□□ -1.75
LIM2P55344 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.14□□□□□ -1.75
LIM2P55344 NIP7P2-201ENST00000485801 544 ntBASIC4.14□□□□□ -1.75
LIM2P55344 RPS27AP16-201ENST00000492222 470 ntBASIC4.14□□□□□ -1.75
LIM2P55344 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LIM2P55344 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.14□□□□□ -1.75
LIM2P55344 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.14□□□□□ -1.75
LIM2P55344 OR5BC1P-201ENST00000529327 739 ntBASIC4.14□□□□□ -1.75
LIM2P55344 NPM1P35-201ENST00000533043 868 ntBASIC4.14□□□□□ -1.75
LIM2P55344 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.14□□□□□ -1.75
LIM2P55344 AL121834.1-201ENST00000572284 509 ntBASIC4.14□□□□□ -1.75
LIM2P55344 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.14□□□□□ -1.75
LIM2P55344 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
LIM2P55344 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.14□□□□□ -1.75
LIM2P55344 AL122125.1-201ENST00000616999 600 ntBASIC4.14□□□□□ -1.75
LIM2P55344 uc_338.13-201ENST00000618243 179 ntBASIC4.14□□□□□ -1.75
LIM2P55344 OR5AC4P-202ENST00000642086 985 ntBASIC4.14□□□□□ -1.75
LIM2P55344 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.14□□□□□ -1.75
LIM2P55344 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.14□□□□□ -1.75
LIM2P55344 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LIM2P55344 AC090017.1-201ENST00000548612 1779 ntBASIC4.14□□□□□ -1.75
LIM2P55344 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LIM2P55344 AC104118.1-201ENST00000607625 1589 ntBASIC4.14□□□□□ -1.75
LIM2P55344 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
LIM2P55344 MTND4P21-201ENST00000453886 1357 ntBASIC4.14□□□□□ -1.75
LIM2P55344 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
LIM2P55344 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LIM2P55344 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
LIM2P55344 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LIM2P55344 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LIM2P55344 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.13□□□□□ -1.75
LIM2P55344 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LIM2P55344 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms