Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.96□□□□□ -1.45
EPHB3P54753 BX284613.1-201ENST00000452221 1641 ntBASIC5.96□□□□□ -1.45
EPHB3P54753 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.96□□□□□ -1.45
EPHB3P54753 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
EPHB3P54753 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
EPHB3P54753 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
EPHB3P54753 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC5.96□□□□□ -1.46
EPHB3P54753 LINC01963-201ENST00000562038 3148 ntBASIC5.96□□□□□ -1.46
EPHB3P54753 MRRFP1-201ENST00000435941 1675 ntBASIC5.96□□□□□ -1.46
EPHB3P54753 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
EPHB3P54753 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
EPHB3P54753 RNU6-348P-201ENST00000384386 107 ntBASIC5.96□□□□□ -1.46
EPHB3P54753 RNU6-253P-201ENST00000384730 105 ntBASIC5.96□□□□□ -1.46
EPHB3P54753 RPS15AP38-201ENST00000413110 372 ntBASIC5.96□□□□□ -1.46
EPHB3P54753 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC5.96□□□□□ -1.46
EPHB3P54753 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.96□□□□□ -1.46
EPHB3P54753 OR5W1P-201ENST00000423705 938 ntBASIC5.96□□□□□ -1.46
EPHB3P54753 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC5.96□□□□□ -1.46
EPHB3P54753 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC5.96□□□□□ -1.46
EPHB3P54753 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.96□□□□□ -1.46
EPHB3P54753 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.96□□□□□ -1.46
EPHB3P54753 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.96□□□□□ -1.46
EPHB3P54753 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC5.96□□□□□ -1.46
EPHB3P54753 MTND6P5-201ENST00000448266 512 ntBASIC5.96□□□□□ -1.46
EPHB3P54753 NANOGNBP1-201ENST00000448444 480 ntBASIC5.96□□□□□ -1.46
EPHB3P54753 OR9M1P-201ENST00000459641 921 ntBASIC5.96□□□□□ -1.46
EPHB3P54753 AC006499.5-201ENST00000505037 514 ntBASIC5.96□□□□□ -1.46
EPHB3P54753 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC5.96□□□□□ -1.46
EPHB3P54753 SNORA31.13-201ENST00000516624 135 ntBASIC5.96□□□□□ -1.46
EPHB3P54753 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.96□□□□□ -1.46
EPHB3P54753 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.96□□□□□ -1.46
EPHB3P54753 AP003080.1-202ENST00000526526 915 ntBASIC5.96□□□□□ -1.46
EPHB3P54753 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.96□□□□□ -1.46
EPHB3P54753 CYP2C60P-201ENST00000566088 139 ntBASIC5.96□□□□□ -1.46
EPHB3P54753 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.96□□□□□ -1.46
EPHB3P54753 MIR4443-201ENST00000585052 53 ntBASIC5.96□□□□□ -1.46
EPHB3P54753 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.96□□□□□ -1.46
EPHB3P54753 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.96□□□□□ -1.46
EPHB3P54753 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.96□□□□□ -1.46
EPHB3P54753 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
EPHB3P54753 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
EPHB3P54753 AP000907.4-201ENST00000604143 237 ntBASIC5.96□□□□□ -1.46
EPHB3P54753 AL445222.1-201ENST00000607259 628 ntBASIC5.96□□□□□ -1.46
EPHB3P54753 AC009704.2-201ENST00000618739 483 ntBASIC5.96□□□□□ -1.46
EPHB3P54753 AC241377.1-201ENST00000619797 406 ntBASIC5.96□□□□□ -1.46
EPHB3P54753 MIR6837-201ENST00000620884 64 ntBASIC5.96□□□□□ -1.46
EPHB3P54753 AC069234.4-201ENST00000621276 412 ntBASIC5.96□□□□□ -1.46
EPHB3P54753 AC132068.1-201ENST00000623805 459 ntBASIC5.96□□□□□ -1.46
EPHB3P54753 AC112204.3-201ENST00000623822 332 ntBASIC5.96□□□□□ -1.46
EPHB3P54753 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.96□□□□□ -1.46
EPHB3P54753 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.96□□□□□ -1.46
EPHB3P54753 MFSD8-245ENST00000641743 948 ntBASIC5.96□□□□□ -1.46
EPHB3P54753 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
EPHB3P54753 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
EPHB3P54753 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
EPHB3P54753 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
EPHB3P54753 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
EPHB3P54753 AC005224.3-201ENST00000584683 2140 ntBASIC5.96□□□□□ -1.46
EPHB3P54753 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
EPHB3P54753 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
EPHB3P54753 AP005901.5-201ENST00000545779 1796 ntBASIC5.95□□□□□ -1.46
EPHB3P54753 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
EPHB3P54753 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
EPHB3P54753 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
EPHB3P54753 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
EPHB3P54753 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.95□□□□□ -1.46
EPHB3P54753 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
EPHB3P54753 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
EPHB3P54753 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
EPHB3P54753 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
EPHB3P54753 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
EPHB3P54753 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
EPHB3P54753 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
EPHB3P54753 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.95□□□□□ -1.46
EPHB3P54753 OR1L1-202ENST00000373686 1083 ntBASIC5.95□□□□□ -1.46
EPHB3P54753 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
EPHB3P54753 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
EPHB3P54753 MIR130A-201ENST00000385274 89 ntBASIC5.95□□□□□ -1.46
EPHB3P54753 SNORD115-47-201ENST00000391226 86 ntBASIC5.95□□□□□ -1.46
EPHB3P54753 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
EPHB3P54753 AC009804.1-201ENST00000400949 179 ntBASIC5.95□□□□□ -1.46
EPHB3P54753 CIR1P3-201ENST00000405137 479 ntBASIC5.95□□□□□ -1.46
EPHB3P54753 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC5.95□□□□□ -1.46
EPHB3P54753 Z93019.1-201ENST00000416450 973 ntBASIC5.95□□□□□ -1.46
EPHB3P54753 NPM1P24-201ENST00000428039 894 ntBASIC5.95□□□□□ -1.46
EPHB3P54753 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.95□□□□□ -1.46
EPHB3P54753 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.95□□□□□ -1.46
EPHB3P54753 PAXBP1P1-201ENST00000449315 447 ntBASIC5.95□□□□□ -1.46
EPHB3P54753 RANP1-206ENST00000455094 651 ntBASIC5.95□□□□□ -1.46
EPHB3P54753 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.95□□□□□ -1.46
EPHB3P54753 CDC42P1-201ENST00000456658 548 ntBASIC5.95□□□□□ -1.46
EPHB3P54753 MTND1P11-201ENST00000456661 876 ntBASIC5.95□□□□□ -1.46
EPHB3P54753 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.95□□□□□ -1.46
EPHB3P54753 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.95□□□□□ -1.46
EPHB3P54753 RPL5P13-201ENST00000462840 709 ntBASIC5.95□□□□□ -1.46
EPHB3P54753 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.95□□□□□ -1.46
EPHB3P54753 DUTP1-201ENST00000493631 470 ntBASIC5.95□□□□□ -1.46
EPHB3P54753 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC5.95□□□□□ -1.46
EPHB3P54753 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.95□□□□□ -1.46
EPHB3P54753 AC079395.1-201ENST00000510981 262 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 148.3 ms