Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 RPL23AP97-201ENST00000568955 471 ntBASIC4.16□□□□□ -1.74
GTF2A1P52655 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.16□□□□□ -1.74
GTF2A1P52655 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.16□□□□□ -1.74
GTF2A1P52655 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.16□□□□□ -1.74
GTF2A1P52655 AL160290.3-201ENST00000604869 165 ntBASIC4.16□□□□□ -1.74
GTF2A1P52655 AL365503.1-201ENST00000605247 905 ntBASIC4.16□□□□□ -1.74
GTF2A1P52655 AC116651.1-201ENST00000609724 556 ntBASIC4.16□□□□□ -1.74
GTF2A1P52655 OR2L1P-202ENST00000641567 1023 ntBASIC4.16□□□□□ -1.74
GTF2A1P52655 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
GTF2A1P52655 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
GTF2A1P52655 AC099654.2-201ENST00000433031 1980 ntBASIC4.16□□□□□ -1.74
GTF2A1P52655 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
GTF2A1P52655 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.16□□□□□ -1.74
GTF2A1P52655 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
GTF2A1P52655 THAP12P4-201ENST00000528321 2266 ntBASIC4.15□□□□□ -1.74
GTF2A1P52655 AC005183.1-201ENST00000603687 1979 ntBASIC4.15□□□□□ -1.74
GTF2A1P52655 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.75
GTF2A1P52655 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
GTF2A1P52655 METTL5-202ENST00000308099 629 ntTSL 3 BASIC4.15□□□□□ -1.75
GTF2A1P52655 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.15□□□□□ -1.75
GTF2A1P52655 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
GTF2A1P52655 RNU6-1263P-201ENST00000384601 106 ntBASIC4.15□□□□□ -1.75
GTF2A1P52655 AL590762.2-201ENST00000395798 571 ntBASIC4.15□□□□□ -1.75
GTF2A1P52655 RPL5P19-201ENST00000404228 893 ntBASIC4.15□□□□□ -1.75
GTF2A1P52655 MTHFD2P2-201ENST00000407725 247 ntBASIC4.15□□□□□ -1.75
GTF2A1P52655 RPL23AP1-201ENST00000428990 471 ntBASIC4.15□□□□□ -1.75
GTF2A1P52655 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.15□□□□□ -1.75
GTF2A1P52655 NDUFA5P1-201ENST00000433858 341 ntBASIC4.15□□□□□ -1.75
GTF2A1P52655 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.15□□□□□ -1.75
GTF2A1P52655 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.15□□□□□ -1.75
GTF2A1P52655 RN7SL222P-201ENST00000476452 299 ntBASIC4.15□□□□□ -1.75
GTF2A1P52655 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.15□□□□□ -1.75
GTF2A1P52655 PHBP14-201ENST00000512887 367 ntBASIC4.15□□□□□ -1.75
GTF2A1P52655 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.15□□□□□ -1.75
GTF2A1P52655 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.15□□□□□ -1.75
GTF2A1P52655 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.15□□□□□ -1.75
GTF2A1P52655 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
GTF2A1P52655 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.15□□□□□ -1.75
GTF2A1P52655 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.15□□□□□ -1.75
GTF2A1P52655 NDUFA5P11-201ENST00000567995 343 ntBASIC4.15□□□□□ -1.75
GTF2A1P52655 MIR5699-201ENST00000578903 90 ntBASIC4.15□□□□□ -1.75
GTF2A1P52655 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.15□□□□□ -1.75
GTF2A1P52655 Z98200.1-201ENST00000607298 470 ntBASIC4.15□□□□□ -1.75
GTF2A1P52655 AC007497.1-201ENST00000610421 561 ntBASIC4.15□□□□□ -1.75
GTF2A1P52655 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.15□□□□□ -1.75
GTF2A1P52655 AC095038.2-201ENST00000621464 1070 ntBASIC4.15□□□□□ -1.75
GTF2A1P52655 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
GTF2A1P52655 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
GTF2A1P52655 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.15□□□□□ -1.75
GTF2A1P52655 AC109780.1-201ENST00000451768 1344 ntBASIC4.15□□□□□ -1.75
GTF2A1P52655 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
GTF2A1P52655 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
GTF2A1P52655 AP001148.1-201ENST00000624124 2359 ntBASIC4.14□□□□□ -1.75
GTF2A1P52655 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
GTF2A1P52655 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
GTF2A1P52655 SYT14P1-202ENST00000600441 1448 ntBASIC4.14□□□□□ -1.75
GTF2A1P52655 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
GTF2A1P52655 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
GTF2A1P52655 RN7SKP103-201ENST00000363848 320 ntBASIC4.14□□□□□ -1.75
GTF2A1P52655 RNU1-82P-201ENST00000390851 165 ntBASIC4.14□□□□□ -1.75
GTF2A1P52655 RNA5SP332-201ENST00000391063 115 ntBASIC4.14□□□□□ -1.75
GTF2A1P52655 ATP5F1P4-201ENST00000397288 746 ntBASIC4.14□□□□□ -1.75
GTF2A1P52655 Z97832.1-201ENST00000402490 328 ntBASIC4.14□□□□□ -1.75
GTF2A1P52655 OR3A2-201ENST00000408891 1076 ntBASIC4.14□□□□□ -1.75
GTF2A1P52655 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.14□□□□□ -1.75
GTF2A1P52655 RPL31P12-201ENST00000422587 358 ntBASIC4.14□□□□□ -1.75
GTF2A1P52655 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.14□□□□□ -1.75
GTF2A1P52655 LYPLA1P1-201ENST00000434514 622 ntBASIC4.14□□□□□ -1.75
GTF2A1P52655 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.14□□□□□ -1.75
GTF2A1P52655 OR2AO1P-201ENST00000476497 403 ntBASIC4.14□□□□□ -1.75
GTF2A1P52655 AC090114.3-201ENST00000479267 829 ntBASIC4.14□□□□□ -1.75
GTF2A1P52655 RPL31P61-201ENST00000496160 376 ntBASIC4.14□□□□□ -1.75
GTF2A1P52655 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.14□□□□□ -1.75
GTF2A1P52655 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.14□□□□□ -1.75
GTF2A1P52655 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.14□□□□□ -1.75
GTF2A1P52655 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.14□□□□□ -1.75
GTF2A1P52655 AL133457.1-201ENST00000564251 987 ntBASIC4.14□□□□□ -1.75
GTF2A1P52655 RN7SL802P-201ENST00000577858 299 ntBASIC4.14□□□□□ -1.75
GTF2A1P52655 AC011447.4-201ENST00000587562 111 ntBASIC4.14□□□□□ -1.75
GTF2A1P52655 MRPS35P3-201ENST00000603189 709 ntBASIC4.14□□□□□ -1.75
GTF2A1P52655 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.14□□□□□ -1.75
GTF2A1P52655 AC006946.3-201ENST00000609791 756 ntBASIC4.14□□□□□ -1.75
GTF2A1P52655 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.14□□□□□ -1.75
GTF2A1P52655 XIST_intron.1-201ENST00000619444 68 ntBASIC4.14□□□□□ -1.75
GTF2A1P52655 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
GTF2A1P52655 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
GTF2A1P52655 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.14□□□□□ -1.75
GTF2A1P52655 AC092326.2-201ENST00000624772 1561 ntBASIC4.14□□□□□ -1.75
GTF2A1P52655 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
GTF2A1P52655 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
GTF2A1P52655 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
GTF2A1P52655 AC009229.4-201ENST00000623854 1947 ntBASIC4.13□□□□□ -1.75
GTF2A1P52655 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
GTF2A1P52655 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.13□□□□□ -1.75
GTF2A1P52655 SNORA17A-201ENST00000391185 133 ntBASIC4.13□□□□□ -1.75
GTF2A1P52655 U3.36-201ENST00000408418 213 ntBASIC4.13□□□□□ -1.75
GTF2A1P52655 MIR1911-201ENST00000410783 80 ntBASIC4.13□□□□□ -1.75
GTF2A1P52655 NPM1P4-201ENST00000414095 812 ntBASIC4.13□□□□□ -1.75
GTF2A1P52655 AC007390.1-201ENST00000415722 356 ntBASIC4.13□□□□□ -1.75
GTF2A1P52655 GLUD1P9-201ENST00000420997 1173 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms