Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 EIF4A1P3-201ENST00000411521 244 ntBASIC4.79□□□□□ -1.64
CLCNKAP51800 UBE2V1P9-201ENST00000414760 368 ntBASIC4.79□□□□□ -1.64
CLCNKAP51800 AC023128.2-201ENST00000420880 1223 ntBASIC4.79□□□□□ -1.64
CLCNKAP51800 AL158073.1-201ENST00000426848 1104 ntBASIC4.79□□□□□ -1.64
CLCNKAP51800 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.79□□□□□ -1.64
CLCNKAP51800 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.79□□□□□ -1.64
CLCNKAP51800 AL035458.1-201ENST00000433096 585 ntBASIC4.79□□□□□ -1.64
CLCNKAP51800 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLCNKAP51800 MRPL35P2-201ENST00000448009 511 ntBASIC4.79□□□□□ -1.64
CLCNKAP51800 AC234781.3-201ENST00000452540 973 ntBASIC4.79□□□□□ -1.64
CLCNKAP51800 RPS5P7-201ENST00000456664 608 ntBASIC4.79□□□□□ -1.64
CLCNKAP51800 AC063943.1-201ENST00000465434 453 ntBASIC4.79□□□□□ -1.64
CLCNKAP51800 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.79□□□□□ -1.64
CLCNKAP51800 RNU6-276P-201ENST00000516114 96 ntBASIC4.79□□□□□ -1.64
CLCNKAP51800 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.79□□□□□ -1.64
CLCNKAP51800 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.79□□□□□ -1.64
CLCNKAP51800 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.79□□□□□ -1.64
CLCNKAP51800 CYB5AP5-201ENST00000549779 389 ntBASIC4.79□□□□□ -1.64
CLCNKAP51800 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.79□□□□□ -1.64
CLCNKAP51800 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.79□□□□□ -1.64
CLCNKAP51800 UBE2FP2-201ENST00000566646 462 ntBASIC4.79□□□□□ -1.64
CLCNKAP51800 MIR4700-201ENST00000578311 74 ntBASIC4.79□□□□□ -1.64
CLCNKAP51800 AC091042.1-201ENST00000579213 173 ntBASIC4.79□□□□□ -1.64
CLCNKAP51800 MIR3667-201ENST00000581025 74 ntBASIC4.79□□□□□ -1.64
CLCNKAP51800 AL022067.1-201ENST00000602426 454 ntBASIC4.79□□□□□ -1.64
CLCNKAP51800 AC123786.2-201ENST00000603459 275 ntBASIC4.79□□□□□ -1.64
CLCNKAP51800 AP002802.2-201ENST00000605877 235 ntBASIC4.79□□□□□ -1.64
CLCNKAP51800 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.79□□□□□ -1.64
CLCNKAP51800 AC100827.5-201ENST00000615883 426 ntBASIC4.79□□□□□ -1.64
CLCNKAP51800 CYCSP41-201ENST00000616920 296 ntBASIC4.79□□□□□ -1.64
CLCNKAP51800 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.79□□□□□ -1.64
CLCNKAP51800 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.79□□□□□ -1.64
CLCNKAP51800 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.79□□□□□ -1.64
CLCNKAP51800 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLCNKAP51800 AC008758.3-201ENST00000507003 1829 ntBASIC4.79□□□□□ -1.64
CLCNKAP51800 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.78□□□□□ -1.64
CLCNKAP51800 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLCNKAP51800 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLCNKAP51800 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.78□□□□□ -1.64
CLCNKAP51800 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.78□□□□□ -1.64
CLCNKAP51800 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLCNKAP51800 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLCNKAP51800 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CLCNKAP51800 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CLCNKAP51800 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLCNKAP51800 RPS3AP25-201ENST00000411660 793 ntBASIC4.78□□□□□ -1.64
CLCNKAP51800 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.78□□□□□ -1.64
CLCNKAP51800 TRGV6-201ENST00000417928 299 ntBASIC4.78□□□□□ -1.64
CLCNKAP51800 AC115285.1-201ENST00000424879 736 ntBASIC4.78□□□□□ -1.64
CLCNKAP51800 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.78□□□□□ -1.64
CLCNKAP51800 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.78□□□□□ -1.64
CLCNKAP51800 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLCNKAP51800 AC093422.3-201ENST00000428506 305 ntBASIC4.78□□□□□ -1.64
CLCNKAP51800 MTATP6P17-201ENST00000431030 672 ntBASIC4.78□□□□□ -1.64
CLCNKAP51800 AC092447.2-201ENST00000435487 669 ntBASIC4.78□□□□□ -1.64
CLCNKAP51800 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLCNKAP51800 AC092013.1-201ENST00000438795 332 ntBASIC4.78□□□□□ -1.64
CLCNKAP51800 ARF4P4-201ENST00000439608 520 ntBASIC4.78□□□□□ -1.64
CLCNKAP51800 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.78□□□□□ -1.64
CLCNKAP51800 EXOSC3P1-201ENST00000448649 500 ntBASIC4.78□□□□□ -1.64
CLCNKAP51800 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.78□□□□□ -1.64
CLCNKAP51800 AP000942.1-201ENST00000463969 747 ntBASIC4.78□□□□□ -1.64
CLCNKAP51800 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLCNKAP51800 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.78□□□□□ -1.64
CLCNKAP51800 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC4.78□□□□□ -1.64
CLCNKAP51800 AC108120.2-201ENST00000512973 294 ntBASIC4.78□□□□□ -1.64
CLCNKAP51800 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.78□□□□□ -1.64
CLCNKAP51800 AC105031.1-201ENST00000518550 476 ntBASIC4.78□□□□□ -1.64
CLCNKAP51800 AC034205.1-201ENST00000520621 638 ntBASIC4.78□□□□□ -1.64
CLCNKAP51800 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.78□□□□□ -1.64
CLCNKAP51800 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.78□□□□□ -1.64
CLCNKAP51800 AL049870.4-201ENST00000555741 486 ntBASIC4.78□□□□□ -1.64
CLCNKAP51800 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.78□□□□□ -1.64
CLCNKAP51800 AL512782.1-201ENST00000603093 364 ntBASIC4.78□□□□□ -1.64
CLCNKAP51800 AC112220.2-201ENST00000605513 533 ntBASIC4.78□□□□□ -1.64
CLCNKAP51800 AC006946.3-201ENST00000609791 756 ntBASIC4.78□□□□□ -1.64
CLCNKAP51800 AC068787.1-201ENST00000623908 691 ntBASIC4.78□□□□□ -1.64
CLCNKAP51800 AC011815.3-201ENST00000624194 473 ntBASIC4.78□□□□□ -1.64
CLCNKAP51800 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.78□□□□□ -1.64
CLCNKAP51800 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.78□□□□□ -1.64
CLCNKAP51800 AL672167.1-204ENST00000641875 3017 ntBASIC4.78□□□□□ -1.64
CLCNKAP51800 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLCNKAP51800 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.78□□□□□ -1.64
CLCNKAP51800 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLCNKAP51800 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLCNKAP51800 AP000542.2-201ENST00000623199 6179 ntBASIC4.78□□□□□ -1.64
CLCNKAP51800 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.78□□□□□ -1.64
CLCNKAP51800 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.78□□□□□ -1.64
CLCNKAP51800 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLCNKAP51800 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CLCNKAP51800 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.78□□□□□ -1.64
CLCNKAP51800 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLCNKAP51800 ZFRP1-201ENST00000457579 2970 ntBASIC4.77□□□□□ -1.65
CLCNKAP51800 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CLCNKAP51800 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLCNKAP51800 MAPK10-304ENST00000641341 3984 ntBASIC4.77□□□□□ -1.65
CLCNKAP51800 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLCNKAP51800 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLCNKAP51800 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.77□□□□□ -1.65
CLCNKAP51800 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms