Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 SS18L2P2-201ENST00000583960 235 ntBASIC5.08□□□□□ -1.6
CLCN3P51790 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.08□□□□□ -1.6
CLCN3P51790 AC006363.1-201ENST00000603806 463 ntBASIC5.08□□□□□ -1.6
CLCN3P51790 AL731566.2-201ENST00000618971 317 ntBASIC5.08□□□□□ -1.6
CLCN3P51790 AC091046.2-201ENST00000620775 665 ntBASIC5.08□□□□□ -1.6
CLCN3P51790 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.08□□□□□ -1.6
CLCN3P51790 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLCN3P51790 AL031595.2-201ENST00000624215 19071 ntBASIC5.08□□□□□ -1.6
CLCN3P51790 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.07□□□□□ -1.6
CLCN3P51790 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.07□□□□□ -1.6
CLCN3P51790 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.07□□□□□ -1.6
CLCN3P51790 CASC19-206ENST00000641028 1430 ntBASIC5.07□□□□□ -1.6
CLCN3P51790 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.07□□□□□ -1.6
CLCN3P51790 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLCN3P51790 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLCN3P51790 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.07□□□□□ -1.6
CLCN3P51790 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CLCN3P51790 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLCN3P51790 SNORA72.3-201ENST00000365074 132 ntBASIC5.07□□□□□ -1.6
CLCN3P51790 RNU6-925P-201ENST00000384629 104 ntBASIC5.07□□□□□ -1.6
CLCN3P51790 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CLCN3P51790 RSL24D1P1-201ENST00000404972 493 ntBASIC5.07□□□□□ -1.6
CLCN3P51790 RNU4-25P-201ENST00000410569 230 ntBASIC5.07□□□□□ -1.6
CLCN3P51790 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.07□□□□□ -1.6
CLCN3P51790 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLCN3P51790 FTLP19-201ENST00000433300 394 ntBASIC5.07□□□□□ -1.6
CLCN3P51790 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.07□□□□□ -1.6
CLCN3P51790 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.07□□□□□ -1.6
CLCN3P51790 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.07□□□□□ -1.6
CLCN3P51790 AL096829.2-201ENST00000446582 742 ntBASIC5.07□□□□□ -1.6
CLCN3P51790 HMGB1P26-201ENST00000452520 628 ntBASIC5.07□□□□□ -1.6
CLCN3P51790 Z95152.1-201ENST00000453556 656 ntBASIC5.07□□□□□ -1.6
CLCN3P51790 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CLCN3P51790 ATP5G1P3-201ENST00000463301 410 ntBASIC5.07□□□□□ -1.6
CLCN3P51790 RPS23P7-201ENST00000466210 444 ntBASIC5.07□□□□□ -1.6
CLCN3P51790 RN7SL385P-201ENST00000468873 276 ntBASIC5.07□□□□□ -1.6
CLCN3P51790 AC069304.1-201ENST00000491593 704 ntBASIC5.07□□□□□ -1.6
CLCN3P51790 IGLVIV-65-201ENST00000517313 360 ntBASIC5.07□□□□□ -1.6
CLCN3P51790 AP001372.4-201ENST00000524889 472 ntBASIC5.07□□□□□ -1.6
CLCN3P51790 NPM1P35-201ENST00000533043 868 ntBASIC5.07□□□□□ -1.6
CLCN3P51790 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.07□□□□□ -1.6
CLCN3P51790 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.07□□□□□ -1.6
CLCN3P51790 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.07□□□□□ -1.6
CLCN3P51790 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.07□□□□□ -1.6
CLCN3P51790 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC5.07□□□□□ -1.6
CLCN3P51790 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.07□□□□□ -1.6
CLCN3P51790 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.07□□□□□ -1.6
CLCN3P51790 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.07□□□□□ -1.6
CLCN3P51790 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.07□□□□□ -1.6
CLCN3P51790 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.07□□□□□ -1.6
CLCN3P51790 AC026741.1-201ENST00000605892 482 ntBASIC5.07□□□□□ -1.6
CLCN3P51790 AC097504.2-201ENST00000608088 454 ntBASIC5.07□□□□□ -1.6
CLCN3P51790 AP005229.2-201ENST00000609980 697 ntBASIC5.07□□□□□ -1.6
CLCN3P51790 AC012409.3-201ENST00000611343 981 ntBASIC5.07□□□□□ -1.6
CLCN3P51790 AP004607.9-201ENST00000618202 316 ntBASIC5.07□□□□□ -1.6
CLCN3P51790 AP005019.3-201ENST00000620418 560 ntBASIC5.07□□□□□ -1.6
CLCN3P51790 AC074140.1-201ENST00000621617 208 ntBASIC5.07□□□□□ -1.6
CLCN3P51790 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC5.07□□□□□ -1.6
CLCN3P51790 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC5.07□□□□□ -1.6
CLCN3P51790 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLCN3P51790 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLCN3P51790 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLCN3P51790 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CLCN3P51790 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLCN3P51790 VN2R3P-201ENST00000422626 1412 ntBASIC5.06□□□□□ -1.6
CLCN3P51790 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
CLCN3P51790 HSPD1P11-201ENST00000508643 1702 ntBASIC5.06□□□□□ -1.6
CLCN3P51790 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLCN3P51790 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLCN3P51790 MFSD8-213ENST00000641134 1327 ntBASIC5.06□□□□□ -1.6
CLCN3P51790 AC025031.4-201ENST00000621248 3271 ntBASIC5.06□□□□□ -1.6
CLCN3P51790 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLCN3P51790 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLCN3P51790 AC069282.1-201ENST00000411911 526 ntBASIC5.06□□□□□ -1.6
CLCN3P51790 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.06□□□□□ -1.6
CLCN3P51790 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.06□□□□□ -1.6
CLCN3P51790 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.06□□□□□ -1.6
CLCN3P51790 MTCO1P43-201ENST00000431831 488 ntBASIC5.06□□□□□ -1.6
CLCN3P51790 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.06□□□□□ -1.6
CLCN3P51790 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.06□□□□□ -1.6
CLCN3P51790 CBX1P1-201ENST00000440184 427 ntBASIC5.06□□□□□ -1.6
CLCN3P51790 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5.06□□□□□ -1.6
CLCN3P51790 AC092685.1-201ENST00000447960 1243 ntBASIC5.06□□□□□ -1.6
CLCN3P51790 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC5.06□□□□□ -1.6
CLCN3P51790 AC023424.1-201ENST00000496058 459 ntBASIC5.06□□□□□ -1.6
CLCN3P51790 PPM1AP1-201ENST00000502740 1135 ntBASIC5.06□□□□□ -1.6
CLCN3P51790 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.06□□□□□ -1.6
CLCN3P51790 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.06□□□□□ -1.6
CLCN3P51790 AC010460.2-201ENST00000509054 677 ntBASIC5.06□□□□□ -1.6
CLCN3P51790 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.06□□□□□ -1.6
CLCN3P51790 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.06□□□□□ -1.6
CLCN3P51790 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CLCN3P51790 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.06□□□□□ -1.6
CLCN3P51790 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.06□□□□□ -1.6
CLCN3P51790 AC011374.2-201ENST00000607135 526 ntBASIC5.06□□□□□ -1.6
CLCN3P51790 AC016597.2-201ENST00000613256 341 ntBASIC5.06□□□□□ -1.6
CLCN3P51790 AC015914.2-201ENST00000618167 288 ntBASIC5.06□□□□□ -1.6
CLCN3P51790 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLCN3P51790 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLCN3P51790 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms