Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
BRCA2P51587 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
BRCA2P51587 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
BRCA2P51587 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
BRCA2P51587 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC4.31□□□□□ -1.72
BRCA2P51587 AL513548.1-201ENST00000562904 1724 ntBASIC4.31□□□□□ -1.72
BRCA2P51587 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.31□□□□□ -1.72
BRCA2P51587 OOSP1P1-201ENST00000423265 274 ntBASIC4.31□□□□□ -1.72
BRCA2P51587 OR52Y1P-201ENST00000452418 828 ntBASIC4.31□□□□□ -1.72
BRCA2P51587 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.31□□□□□ -1.72
BRCA2P51587 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
BRCA2P51587 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.31□□□□□ -1.72
BRCA2P51587 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.31□□□□□ -1.72
BRCA2P51587 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.31□□□□□ -1.72
BRCA2P51587 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
BRCA2P51587 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
BRCA2P51587 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
BRCA2P51587 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
BRCA2P51587 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
BRCA2P51587 AP000473.2-201ENST00000602659 1537 ntBASIC4.31□□□□□ -1.72
BRCA2P51587 BMS1P3-201ENST00000372011 932 ntBASIC4.31□□□□□ -1.72
BRCA2P51587 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.31□□□□□ -1.72
BRCA2P51587 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC4.31□□□□□ -1.72
BRCA2P51587 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.31□□□□□ -1.72
BRCA2P51587 AC068790.5-201ENST00000602741 355 ntBASIC4.31□□□□□ -1.72
BRCA2P51587 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
BRCA2P51587 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC4.31□□□□□ -1.72
BRCA2P51587 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.31□□□□□ -1.72
BRCA2P51587 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
BRCA2P51587 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
BRCA2P51587 BDP1P-201ENST00000582658 1990 ntBASIC4.3□□□□□ -1.72
BRCA2P51587 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.3□□□□□ -1.72
BRCA2P51587 TTC3P1-201ENST00000399586 6081 ntBASIC4.3□□□□□ -1.72
BRCA2P51587 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.3□□□□□ -1.72
BRCA2P51587 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.3□□□□□ -1.72
BRCA2P51587 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.3□□□□□ -1.72
BRCA2P51587 CCRL1P1-201ENST00000449542 1053 ntBASIC4.3□□□□□ -1.72
BRCA2P51587 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
BRCA2P51587 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
BRCA2P51587 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
BRCA2P51587 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
BRCA2P51587 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
BRCA2P51587 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
BRCA2P51587 AC090013.1-201ENST00000485147 480 ntBASIC4.3□□□□□ -1.72
BRCA2P51587 RNU7-143P-201ENST00000516781 65 ntBASIC4.3□□□□□ -1.72
BRCA2P51587 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.3□□□□□ -1.72
BRCA2P51587 AL391497.1-201ENST00000608671 547 ntBASIC4.3□□□□□ -1.72
BRCA2P51587 AC091905.2-201ENST00000623143 306 ntBASIC4.3□□□□□ -1.72
BRCA2P51587 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.3□□□□□ -1.72
BRCA2P51587 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
BRCA2P51587 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
BRCA2P51587 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
BRCA2P51587 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
BRCA2P51587 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
BRCA2P51587 RNA5SP175-201ENST00000364275 119 ntBASIC4.3□□□□□ -1.72
BRCA2P51587 CYCSP35-201ENST00000451978 304 ntBASIC4.3□□□□□ -1.72
BRCA2P51587 RPS4XP18-201ENST00000495480 763 ntBASIC4.3□□□□□ -1.72
BRCA2P51587 SNX6P1-201ENST00000601728 1224 ntBASIC4.3□□□□□ -1.72
BRCA2P51587 IMMP1LP1-201ENST00000605170 488 ntBASIC4.3□□□□□ -1.72
BRCA2P51587 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.3□□□□□ -1.72
BRCA2P51587 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
BRCA2P51587 AC119744.1-201ENST00000454746 1715 ntBASIC4.3□□□□□ -1.72
BRCA2P51587 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
BRCA2P51587 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
BRCA2P51587 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.29□□□□□ -1.72
BRCA2P51587 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
BRCA2P51587 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.29□□□□□ -1.72
BRCA2P51587 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
BRCA2P51587 AC097713.2-201ENST00000430199 356 ntBASIC4.29□□□□□ -1.72
BRCA2P51587 AC073387.1-201ENST00000453261 709 ntBASIC4.29□□□□□ -1.72
BRCA2P51587 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
BRCA2P51587 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.29□□□□□ -1.72
BRCA2P51587 AL355365.1-201ENST00000616480 294 ntBASIC4.29□□□□□ -1.72
BRCA2P51587 GABRA4-201ENST00000264318 11973 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
BRCA2P51587 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
BRCA2P51587 RPL23AP57-201ENST00000332361 466 ntBASIC4.29□□□□□ -1.72
BRCA2P51587 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.29□□□□□ -1.72
BRCA2P51587 AL591419.1-201ENST00000427423 339 ntBASIC4.29□□□□□ -1.72
BRCA2P51587 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
BRCA2P51587 AP001992.1-205ENST00000462248 379 ntBASIC4.29□□□□□ -1.72
BRCA2P51587 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.29□□□□□ -1.72
BRCA2P51587 AP005264.7-201ENST00000625003 745 ntBASIC4.29□□□□□ -1.72
BRCA2P51587 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
BRCA2P51587 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.29□□□□□ -1.72
BRCA2P51587 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
BRCA2P51587 AC090337.1-201ENST00000579651 2074 ntBASIC4.29□□□□□ -1.72
BRCA2P51587 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.29□□□□□ -1.72
BRCA2P51587 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.28□□□□□ -1.72
BRCA2P51587 ATP5JP1-201ENST00000431631 322 ntBASIC4.28□□□□□ -1.72
BRCA2P51587 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.28□□□□□ -1.72
BRCA2P51587 Vault.1-201ENST00000516474 102 ntBASIC4.28□□□□□ -1.72
BRCA2P51587 MIR5680-201ENST00000577577 84 ntBASIC4.28□□□□□ -1.72
BRCA2P51587 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
BRCA2P51587 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
BRCA2P51587 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
BRCA2P51587 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
BRCA2P51587 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
BRCA2P51587 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC4.28□□□□□ -1.72
BRCA2P51587 AC139426.3-201ENST00000605648 2059 ntBASIC4.28□□□□□ -1.72
BRCA2P51587 LRRC37A9P-201ENST00000603850 5376 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms