Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.8□□□□□ -1.64
LHX1P48742 RPL21P126-201ENST00000470049 478 ntBASIC4.8□□□□□ -1.64
LHX1P48742 AC025459.1-201ENST00000504072 156 ntBASIC4.8□□□□□ -1.64
LHX1P48742 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.8□□□□□ -1.64
LHX1P48742 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.8□□□□□ -1.64
LHX1P48742 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.8□□□□□ -1.64
LHX1P48742 RN7SKP46-201ENST00000515942 234 ntBASIC4.8□□□□□ -1.64
LHX1P48742 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.8□□□□□ -1.64
LHX1P48742 AC092451.2-201ENST00000538746 658 ntBASIC4.8□□□□□ -1.64
LHX1P48742 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
LHX1P48742 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.8□□□□□ -1.64
LHX1P48742 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.8□□□□□ -1.64
LHX1P48742 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.8□□□□□ -1.64
LHX1P48742 SS18L2P2-201ENST00000583960 235 ntBASIC4.8□□□□□ -1.64
LHX1P48742 AC091178.1-203ENST00000584586 279 ntBASIC4.8□□□□□ -1.64
LHX1P48742 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.8□□□□□ -1.64
LHX1P48742 AC090948.1-201ENST00000607464 549 ntBASIC4.8□□□□□ -1.64
LHX1P48742 AP001033.2-201ENST00000609701 1003 ntBASIC4.8□□□□□ -1.64
LHX1P48742 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.8□□□□□ -1.64
LHX1P48742 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
LHX1P48742 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
LHX1P48742 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
LHX1P48742 AC021242.1-201ENST00000507315 2035 ntBASIC4.8□□□□□ -1.64
LHX1P48742 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LHX1P48742 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.8□□□□□ -1.64
LHX1P48742 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LHX1P48742 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LHX1P48742 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.8□□□□□ -1.64
LHX1P48742 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LHX1P48742 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
LHX1P48742 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.79□□□□□ -1.64
LHX1P48742 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
LHX1P48742 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
LHX1P48742 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.79□□□□□ -1.64
LHX1P48742 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LHX1P48742 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
LHX1P48742 AC025031.4-201ENST00000621248 3271 ntBASIC4.79□□□□□ -1.64
LHX1P48742 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LHX1P48742 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.79□□□□□ -1.64
LHX1P48742 MIR320B1-201ENST00000390209 79 ntBASIC4.79□□□□□ -1.64
LHX1P48742 U3.22-201ENST00000391120 215 ntBASIC4.79□□□□□ -1.64
LHX1P48742 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LHX1P48742 RPL23AP59-201ENST00000399415 461 ntBASIC4.79□□□□□ -1.64
LHX1P48742 RNA5SP498-201ENST00000411342 120 ntBASIC4.79□□□□□ -1.64
LHX1P48742 EIF4A1P1-201ENST00000420241 934 ntBASIC4.79□□□□□ -1.64
LHX1P48742 Z74021.1-201ENST00000423610 407 ntBASIC4.79□□□□□ -1.64
LHX1P48742 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.79□□□□□ -1.64
LHX1P48742 AL732292.1-201ENST00000426692 226 ntBASIC4.79□□□□□ -1.64
LHX1P48742 AC016712.1-201ENST00000431088 378 ntBASIC4.79□□□□□ -1.64
LHX1P48742 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.79□□□□□ -1.64
LHX1P48742 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.79□□□□□ -1.64
LHX1P48742 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.79□□□□□ -1.64
LHX1P48742 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.79□□□□□ -1.64
LHX1P48742 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.79□□□□□ -1.64
LHX1P48742 AC053481.1-201ENST00000467217 306 ntBASIC4.79□□□□□ -1.64
LHX1P48742 NDUFA5P9-201ENST00000472609 340 ntBASIC4.79□□□□□ -1.64
LHX1P48742 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.79□□□□□ -1.64
LHX1P48742 RFPL4AP5-201ENST00000514977 504 ntBASIC4.79□□□□□ -1.64
LHX1P48742 RN7SKP141-201ENST00000516167 338 ntBASIC4.79□□□□□ -1.64
LHX1P48742 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.79□□□□□ -1.64
LHX1P48742 AC113192.3-201ENST00000529152 742 ntBASIC4.79□□□□□ -1.64
LHX1P48742 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.79□□□□□ -1.64
LHX1P48742 AC068831.4-201ENST00000556118 109 ntBASIC4.79□□□□□ -1.64
LHX1P48742 AC106785.3-201ENST00000564064 847 ntBASIC4.79□□□□□ -1.64
LHX1P48742 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.79□□□□□ -1.64
LHX1P48742 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.79□□□□□ -1.64
LHX1P48742 MIR3936-201ENST00000584304 110 ntBASIC4.79□□□□□ -1.64
LHX1P48742 AP001160.4-201ENST00000596971 382 ntBASIC4.79□□□□□ -1.64
LHX1P48742 RNF138P2-201ENST00000603490 592 ntBASIC4.79□□□□□ -1.64
LHX1P48742 BNIP3P19-201ENST00000605397 577 ntBASIC4.79□□□□□ -1.64
LHX1P48742 AP004607.9-201ENST00000618202 316 ntBASIC4.79□□□□□ -1.64
LHX1P48742 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.79□□□□□ -1.64
LHX1P48742 AC103798.2-201ENST00000624292 632 ntBASIC4.79□□□□□ -1.64
LHX1P48742 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.79□□□□□ -1.64
LHX1P48742 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.79□□□□□ -1.64
LHX1P48742 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
LHX1P48742 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LHX1P48742 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.79□□□□□ -1.64
LHX1P48742 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
LHX1P48742 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LHX1P48742 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
LHX1P48742 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LHX1P48742 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LHX1P48742 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
LHX1P48742 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LHX1P48742 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LHX1P48742 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
LHX1P48742 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LHX1P48742 THAP12P5-201ENST00000405864 2275 ntBASIC4.78□□□□□ -1.64
LHX1P48742 AC015813.6-201ENST00000624409 5808 ntBASIC4.78□□□□□ -1.64
LHX1P48742 RNU4-44P-201ENST00000363050 141 ntBASIC4.78□□□□□ -1.64
LHX1P48742 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
LHX1P48742 UBBP2-201ENST00000376781 231 ntBASIC4.78□□□□□ -1.64
LHX1P48742 RNU4-31P-201ENST00000384211 141 ntBASIC4.78□□□□□ -1.64
LHX1P48742 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.78□□□□□ -1.64
LHX1P48742 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.78□□□□□ -1.64
LHX1P48742 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.78□□□□□ -1.64
LHX1P48742 AC011998.1-201ENST00000433403 117 ntBASIC4.78□□□□□ -1.64
LHX1P48742 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.78□□□□□ -1.64
LHX1P48742 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms