Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.8□□□□□ -1.64
NR4A2P43354 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.8□□□□□ -1.64
NR4A2P43354 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
NR4A2P43354 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NR4A2P43354 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NR4A2P43354 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NR4A2P43354 AC092104.1-201ENST00000497346 1441 ntBASIC4.8□□□□□ -1.64
NR4A2P43354 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
NR4A2P43354 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NR4A2P43354 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NR4A2P43354 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NR4A2P43354 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
NR4A2P43354 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
NR4A2P43354 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.79□□□□□ -1.64
NR4A2P43354 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NR4A2P43354 AC007382.1-201ENST00000624376 2618 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 CASC19-221ENST00000641309 1382 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.79□□□□□ -1.64
NR4A2P43354 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NR4A2P43354 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NR4A2P43354 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NR4A2P43354 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.79□□□□□ -1.64
NR4A2P43354 RNA5SP319-201ENST00000362768 119 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 RNA5SP131-201ENST00000365452 119 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 SNORD116.1-201ENST00000365628 92 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.79□□□□□ -1.64
NR4A2P43354 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NR4A2P43354 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
NR4A2P43354 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
NR4A2P43354 ATP5F1P3-201ENST00000397213 657 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 AC013442.1-201ENST00000397347 228 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 GSTA12P-201ENST00000402398 508 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 RNU2-17P-201ENST00000410290 190 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 RNU4-34P-201ENST00000410431 124 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.79□□□□□ -1.64
NR4A2P43354 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.79□□□□□ -1.64
NR4A2P43354 AC004022.2-201ENST00000413824 193 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 XKRYP4-201ENST00000414395 483 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 UBE2V1P10-201ENST00000414685 269 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.79□□□□□ -1.64
NR4A2P43354 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 HIGD1AP12-201ENST00000427832 281 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.79□□□□□ -1.64
NR4A2P43354 RPL34P26-201ENST00000445636 354 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 MTND4P18-201ENST00000447010 465 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.79□□□□□ -1.64
NR4A2P43354 MRPL35P2-201ENST00000448009 511 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 CCRL1P1-201ENST00000449542 1053 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 XKRYP5-201ENST00000449659 483 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 CYCSP42-201ENST00000450823 238 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.79□□□□□ -1.64
NR4A2P43354 RPL35AP19-201ENST00000469425 329 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 AC100832.1-201ENST00000471945 383 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 COPS8P2-201ENST00000473228 627 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
NR4A2P43354 RN7SL547P-201ENST00000490793 290 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.79□□□□□ -1.64
NR4A2P43354 IGBP1P4-201ENST00000503202 879 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.79□□□□□ -1.64
NR4A2P43354 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.79□□□□□ -1.64
NR4A2P43354 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.79□□□□□ -1.64
NR4A2P43354 RFPL4AP5-201ENST00000514977 504 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 HMGN1P9-201ENST00000515212 298 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 RNA5SP303-201ENST00000516192 130 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 RNU6-232P-201ENST00000517144 64 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.79□□□□□ -1.64
NR4A2P43354 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.79□□□□□ -1.64
NR4A2P43354 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.79□□□□□ -1.64
NR4A2P43354 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.79□□□□□ -1.64
NR4A2P43354 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NR4A2P43354 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.79□□□□□ -1.64
NR4A2P43354 AL049830.4-201ENST00000555149 351 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.79□□□□□ -1.64
NR4A2P43354 AC096996.1-201ENST00000563813 325 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
NR4A2P43354 MIR4311-201ENST00000580794 100 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.79□□□□□ -1.64
NR4A2P43354 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.79□□□□□ -1.64
NR4A2P43354 FKBP1AP1-201ENST00000594588 318 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NR4A2P43354 AP002360.4-201ENST00000606980 481 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 MIR8080-201ENST00000622224 89 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
NR4A2P43354 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
NR4A2P43354 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.79□□□□□ -1.64
NR4A2P43354 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.79□□□□□ -1.64
NR4A2P43354 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
NR4A2P43354 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NR4A2P43354 MTND5P29-201ENST00000458676 1807 ntBASIC4.79□□□□□ -1.64
NR4A2P43354 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.79□□□□□ -1.64
NR4A2P43354 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NR4A2P43354 ZNF849P-201ENST00000594711 1566 ntBASIC4.78□□□□□ -1.64
NR4A2P43354 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
NR4A2P43354 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NR4A2P43354 KARSP3-201ENST00000571212 1504 ntBASIC4.78□□□□□ -1.64
NR4A2P43354 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
NR4A2P43354 LINC01109-201ENST00000603837 3081 ntBASIC4.78□□□□□ -1.64
NR4A2P43354 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
NR4A2P43354 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms