Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
HTTP42858 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.33□□□□□ -1.72
HTTP42858 RNU6-301P-201ENST00000384277 107 ntBASIC4.33□□□□□ -1.72
HTTP42858 AL591419.1-201ENST00000427423 339 ntBASIC4.33□□□□□ -1.72
HTTP42858 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.33□□□□□ -1.72
HTTP42858 APOOP2-201ENST00000461561 539 ntBASIC4.33□□□□□ -1.72
HTTP42858 RPL21P13-201ENST00000488305 481 ntBASIC4.33□□□□□ -1.72
HTTP42858 AC025627.2-201ENST00000576220 160 ntBASIC4.33□□□□□ -1.72
HTTP42858 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
HTTP42858 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
HTTP42858 AC007823.1-201ENST00000569932 1566 ntBASIC4.33□□□□□ -1.72
HTTP42858 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HTTP42858 FTX-215ENST00000638681 9771 ntTSL 5 BASIC4.33□□□□□ -1.72
HTTP42858 BMS1P3-201ENST00000372011 932 ntBASIC4.32□□□□□ -1.72
HTTP42858 MIR199A2-201ENST00000385289 110 ntBASIC4.32□□□□□ -1.72
HTTP42858 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.32□□□□□ -1.72
HTTP42858 RN7SKP18-201ENST00000516005 275 ntBASIC4.32□□□□□ -1.72
HTTP42858 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.32□□□□□ -1.72
HTTP42858 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
HTTP42858 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
HTTP42858 LRRC37A9P-201ENST00000603850 5376 ntBASIC4.32□□□□□ -1.72
HTTP42858 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.32□□□□□ -1.72
HTTP42858 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC4.32□□□□□ -1.72
HTTP42858 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.32□□□□□ -1.72
HTTP42858 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HTTP42858 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HTTP42858 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HTTP42858 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HTTP42858 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.32□□□□□ -1.72
HTTP42858 OR52Y1P-201ENST00000452418 828 ntBASIC4.32□□□□□ -1.72
HTTP42858 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.32□□□□□ -1.72
HTTP42858 AC034105.3-201ENST00000565294 442 ntBASIC4.32□□□□□ -1.72
HTTP42858 AC068790.5-201ENST00000602741 355 ntBASIC4.32□□□□□ -1.72
HTTP42858 AP003175.1-201ENST00000641383 6658 ntBASIC4.32□□□□□ -1.72
HTTP42858 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HTTP42858 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
HTTP42858 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HTTP42858 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HTTP42858 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HTTP42858 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.32□□□□□ -1.72
HTTP42858 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.32□□□□□ -1.72
HTTP42858 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.32□□□□□ -1.72
HTTP42858 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.32□□□□□ -1.72
HTTP42858 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.32□□□□□ -1.72
HTTP42858 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.32□□□□□ -1.72
HTTP42858 RNA5SP303-201ENST00000516192 130 ntBASIC4.32□□□□□ -1.72
HTTP42858 AC084759.1-201ENST00000561168 290 ntBASIC4.32□□□□□ -1.72
HTTP42858 MIR3945-201ENST00000581853 98 ntBASIC4.32□□□□□ -1.72
HTTP42858 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
HTTP42858 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.32□□□□□ -1.72
HTTP42858 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HTTP42858 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
HTTP42858 AP000473.2-201ENST00000602659 1537 ntBASIC4.32□□□□□ -1.72
HTTP42858 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.31□□□□□ -1.72
HTTP42858 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
HTTP42858 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
HTTP42858 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.31□□□□□ -1.72
HTTP42858 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HTTP42858 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.31□□□□□ -1.72
HTTP42858 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.31□□□□□ -1.72
HTTP42858 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
HTTP42858 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.31□□□□□ -1.72
HTTP42858 HMGN1P11-201ENST00000508668 303 ntBASIC4.31□□□□□ -1.72
HTTP42858 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.31□□□□□ -1.72
HTTP42858 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.31□□□□□ -1.72
HTTP42858 AC005344.1-201ENST00000613391 459 ntBASIC4.31□□□□□ -1.72
HTTP42858 AP005264.7-201ENST00000625003 745 ntBASIC4.31□□□□□ -1.72
HTTP42858 AP000542.2-201ENST00000623199 6179 ntBASIC4.31□□□□□ -1.72
HTTP42858 AL513548.1-201ENST00000562904 1724 ntBASIC4.31□□□□□ -1.72
HTTP42858 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.31□□□□□ -1.72
HTTP42858 ITSN2-202ENST00000361999 5814 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HTTP42858 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HTTP42858 AC092111.2-201ENST00000611627 1414 ntBASIC4.31□□□□□ -1.72
HTTP42858 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
HTTP42858 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.31□□□□□ -1.72
HTTP42858 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HTTP42858 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.31□□□□□ -1.72
HTTP42858 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HTTP42858 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
HTTP42858 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.31□□□□□ -1.72
HTTP42858 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.31□□□□□ -1.72
HTTP42858 AC110801.1-201ENST00000623590 212 ntBASIC4.31□□□□□ -1.72
HTTP42858 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.31□□□□□ -1.72
HTTP42858 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HTTP42858 AL049781.1-201ENST00000623195 3585 ntBASIC4.31□□□□□ -1.72
HTTP42858 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HTTP42858 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HTTP42858 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HTTP42858 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.31□□□□□ -1.72
HTTP42858 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HTTP42858 LINC01109-201ENST00000603837 3081 ntBASIC4.31□□□□□ -1.72
HTTP42858 OSTCP5-201ENST00000425293 453 ntBASIC4.3□□□□□ -1.72
HTTP42858 CYCSP35-201ENST00000451978 304 ntBASIC4.3□□□□□ -1.72
HTTP42858 IGKV2-38-201ENST00000517443 247 ntBASIC4.3□□□□□ -1.72
HTTP42858 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.3□□□□□ -1.72
HTTP42858 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.3□□□□□ -1.72
HTTP42858 AC133552.5-201ENST00000604266 540 ntBASIC4.3□□□□□ -1.72
HTTP42858 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HTTP42858 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HTTP42858 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms