Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 SNX18P1Y-201ENST00000616231 511 ntBASIC4.42□□□□□ -1.7
HMGCLP35914 AL035461.2-201ENST00000619201 524 ntBASIC4.42□□□□□ -1.7
HMGCLP35914 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.42□□□□□ -1.7
HMGCLP35914 AC007546.2-201ENST00000623996 360 ntBASIC4.42□□□□□ -1.7
HMGCLP35914 AC106730.3-201ENST00000624568 641 ntBASIC4.42□□□□□ -1.7
HMGCLP35914 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.42□□□□□ -1.7
HMGCLP35914 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.42□□□□□ -1.7
HMGCLP35914 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.42□□□□□ -1.7
HMGCLP35914 SCN1A-220ENST00000641603 12506 ntBASIC4.42□□□□□ -1.7
HMGCLP35914 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMGCLP35914 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
HMGCLP35914 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMGCLP35914 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
HMGCLP35914 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.41□□□□□ -1.7
HMGCLP35914 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
HMGCLP35914 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HMGCLP35914 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.41□□□□□ -1.7
HMGCLP35914 OR5P1P-201ENST00000299512 925 ntBASIC4.41□□□□□ -1.7
HMGCLP35914 MIR708-201ENST00000390708 88 ntBASIC4.41□□□□□ -1.7
HMGCLP35914 AC004448.2-201ENST00000422360 586 ntBASIC4.41□□□□□ -1.7
HMGCLP35914 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.41□□□□□ -1.7
HMGCLP35914 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.41□□□□□ -1.7
HMGCLP35914 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.41□□□□□ -1.7
HMGCLP35914 CCRL1P1-201ENST00000449542 1053 ntBASIC4.41□□□□□ -1.7
HMGCLP35914 RPL31P20-201ENST00000449593 360 ntBASIC4.41□□□□□ -1.7
HMGCLP35914 EIF4A1P11-201ENST00000451239 222 ntBASIC4.41□□□□□ -1.7
HMGCLP35914 AC005008.1-201ENST00000456151 612 ntBASIC4.41□□□□□ -1.7
HMGCLP35914 RN7SL41P-201ENST00000476144 297 ntBASIC4.41□□□□□ -1.7
HMGCLP35914 STMN1P2-201ENST00000508435 439 ntBASIC4.41□□□□□ -1.7
HMGCLP35914 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.41□□□□□ -1.7
HMGCLP35914 RNU6-319P-201ENST00000516025 108 ntBASIC4.41□□□□□ -1.7
HMGCLP35914 RNU6-467P-201ENST00000517027 110 ntBASIC4.41□□□□□ -1.7
HMGCLP35914 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.41□□□□□ -1.7
HMGCLP35914 GSTP1P1-201ENST00000548078 319 ntBASIC4.41□□□□□ -1.7
HMGCLP35914 AC074029.2-201ENST00000551045 634 ntBASIC4.41□□□□□ -1.7
HMGCLP35914 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
HMGCLP35914 MIR5096-201ENST00000583713 70 ntBASIC4.41□□□□□ -1.7
HMGCLP35914 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.41□□□□□ -1.7
HMGCLP35914 RPL26P30-202ENST00000602923 645 ntBASIC4.41□□□□□ -1.7
HMGCLP35914 AC073111.2-201ENST00000605657 1075 ntBASIC4.41□□□□□ -1.7
HMGCLP35914 AC090948.1-201ENST00000607464 549 ntBASIC4.41□□□□□ -1.7
HMGCLP35914 AC091979.2-201ENST00000607514 214 ntBASIC4.41□□□□□ -1.7
HMGCLP35914 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.41□□□□□ -1.7
HMGCLP35914 HPVC1-201ENST00000629899 1198 ntBASIC4.41□□□□□ -1.7
HMGCLP35914 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.41□□□□□ -1.7
HMGCLP35914 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMGCLP35914 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMGCLP35914 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
HMGCLP35914 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMGCLP35914 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.41□□□□□ -1.7
HMGCLP35914 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMGCLP35914 AC018529.3-201ENST00000624212 2254 ntBASIC4.41□□□□□ -1.7
HMGCLP35914 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMGCLP35914 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMGCLP35914 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.4□□□□□ -1.7
HMGCLP35914 AC092435.4-201ENST00000623012 4159 ntBASIC4.4□□□□□ -1.7
HMGCLP35914 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HMGCLP35914 AC025031.4-201ENST00000621248 3271 ntBASIC4.4□□□□□ -1.7
HMGCLP35914 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.4□□□□□ -1.7
HMGCLP35914 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.4□□□□□ -1.7
HMGCLP35914 AC008033.1-201ENST00000216407 1162 ntBASIC4.4□□□□□ -1.71
HMGCLP35914 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HMGCLP35914 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
HMGCLP35914 LAP3P1-201ENST00000403648 294 ntBASIC4.4□□□□□ -1.71
HMGCLP35914 AL589655.1-201ENST00000405398 482 ntBASIC4.4□□□□□ -1.71
HMGCLP35914 SNRPFP1-201ENST00000414761 252 ntBASIC4.4□□□□□ -1.71
HMGCLP35914 AL139095.3-201ENST00000419672 1203 ntBASIC4.4□□□□□ -1.71
HMGCLP35914 AC068287.1-201ENST00000430283 295 ntBASIC4.4□□□□□ -1.71
HMGCLP35914 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.4□□□□□ -1.71
HMGCLP35914 AL132765.1-201ENST00000434165 553 ntBASIC4.4□□□□□ -1.71
HMGCLP35914 FTH1P16-201ENST00000435241 552 ntBASIC4.4□□□□□ -1.71
HMGCLP35914 AP000936.3-201ENST00000438127 255 ntBASIC4.4□□□□□ -1.71
HMGCLP35914 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.4□□□□□ -1.71
HMGCLP35914 ARL5AP3-201ENST00000439327 386 ntBASIC4.4□□□□□ -1.71
HMGCLP35914 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.4□□□□□ -1.71
HMGCLP35914 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.4□□□□□ -1.71
HMGCLP35914 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.4□□□□□ -1.71
HMGCLP35914 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.4□□□□□ -1.71
HMGCLP35914 EIF2S2P4-201ENST00000461070 984 ntBASIC4.4□□□□□ -1.71
HMGCLP35914 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.4□□□□□ -1.71
HMGCLP35914 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.4□□□□□ -1.71
HMGCLP35914 RN7SL810P-201ENST00000493031 276 ntBASIC4.4□□□□□ -1.71
HMGCLP35914 PPM1AP1-201ENST00000502740 1135 ntBASIC4.4□□□□□ -1.71
HMGCLP35914 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.4□□□□□ -1.71
HMGCLP35914 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.4□□□□□ -1.71
HMGCLP35914 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.4□□□□□ -1.71
HMGCLP35914 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.4□□□□□ -1.71
HMGCLP35914 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.4□□□□□ -1.71
HMGCLP35914 AC068831.4-201ENST00000556118 109 ntBASIC4.4□□□□□ -1.71
HMGCLP35914 AC021483.2-201ENST00000567415 758 ntBASIC4.4□□□□□ -1.71
HMGCLP35914 SLC25A36P1-201ENST00000590111 465 ntBASIC4.4□□□□□ -1.71
HMGCLP35914 AL160290.3-201ENST00000604869 165 ntBASIC4.4□□□□□ -1.71
HMGCLP35914 AC012213.4-201ENST00000606457 354 ntBASIC4.4□□□□□ -1.71
HMGCLP35914 AC020923.1-201ENST00000624021 917 ntBASIC4.4□□□□□ -1.71
HMGCLP35914 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.4□□□□□ -1.71
HMGCLP35914 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HMGCLP35914 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
HMGCLP35914 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
HMGCLP35914 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HMGCLP35914 HSPD1P11-201ENST00000508643 1702 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms