Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
USP6P35125 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
USP6P35125 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.55□□□□□ -1.52
USP6P35125 SNORA73.2-201ENST00000364946 201 ntBASIC5.55□□□□□ -1.52
USP6P35125 U8.11-201ENST00000384699 133 ntBASIC5.55□□□□□ -1.52
USP6P35125 U8.12-201ENST00000384701 133 ntBASIC5.55□□□□□ -1.52
USP6P35125 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.55□□□□□ -1.52
USP6P35125 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
USP6P35125 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.55□□□□□ -1.52
USP6P35125 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.55□□□□□ -1.52
USP6P35125 BTG3P1-201ENST00000435859 716 ntBASIC5.55□□□□□ -1.52
USP6P35125 AL157884.3-201ENST00000448273 1184 ntBASIC5.55□□□□□ -1.52
USP6P35125 U8.18-201ENST00000459285 133 ntBASIC5.55□□□□□ -1.52
USP6P35125 RN7SKP157-201ENST00000516174 282 ntBASIC5.55□□□□□ -1.52
USP6P35125 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.55□□□□□ -1.52
USP6P35125 PHBP17-201ENST00000528576 541 ntBASIC5.55□□□□□ -1.52
USP6P35125 MIR4298-201ENST00000584380 73 ntBASIC5.55□□□□□ -1.52
USP6P35125 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.55□□□□□ -1.52
USP6P35125 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.55□□□□□ -1.52
USP6P35125 FP236240.3-201ENST00000623061 327 ntBASIC5.55□□□□□ -1.52
USP6P35125 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
USP6P35125 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
USP6P35125 AC006042.3-201ENST00000454684 1469 ntBASIC5.55□□□□□ -1.52
USP6P35125 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
USP6P35125 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
USP6P35125 AL079305.1-201ENST00000623159 3008 ntBASIC5.54□□□□□ -1.52
USP6P35125 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
USP6P35125 AC123912.3-201ENST00000600907 1367 ntBASIC5.54□□□□□ -1.52
USP6P35125 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.54□□□□□ -1.52
USP6P35125 AL513548.1-201ENST00000562904 1724 ntBASIC5.54□□□□□ -1.52
USP6P35125 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
USP6P35125 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
USP6P35125 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.54□□□□□ -1.52
USP6P35125 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
USP6P35125 AL353748.1-201ENST00000440753 474 ntBASIC5.54□□□□□ -1.52
USP6P35125 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.54□□□□□ -1.52
USP6P35125 RPL7P49-201ENST00000471402 708 ntBASIC5.54□□□□□ -1.52
USP6P35125 AC022336.1-201ENST00000475510 337 ntBASIC5.54□□□□□ -1.52
USP6P35125 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.54□□□□□ -1.52
USP6P35125 RPL29P14-201ENST00000495837 428 ntBASIC5.54□□□□□ -1.52
USP6P35125 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.54□□□□□ -1.52
USP6P35125 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5.54□□□□□ -1.52
USP6P35125 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.54□□□□□ -1.52
USP6P35125 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC5.54□□□□□ -1.52
USP6P35125 AC008759.1-201ENST00000589783 983 ntBASIC5.54□□□□□ -1.52
USP6P35125 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.54□□□□□ -1.52
USP6P35125 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
USP6P35125 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
USP6P35125 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
USP6P35125 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
USP6P35125 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
USP6P35125 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
USP6P35125 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.53□□□□□ -1.52
USP6P35125 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
USP6P35125 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
USP6P35125 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP6P35125 PEX12P1-201ENST00000400284 1048 ntBASIC5.53□□□□□ -1.52
USP6P35125 MIR1271-201ENST00000408537 86 ntBASIC5.53□□□□□ -1.52
USP6P35125 AL450992.3-201ENST00000413192 568 ntBASIC5.53□□□□□ -1.52
USP6P35125 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
USP6P35125 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.53□□□□□ -1.52
USP6P35125 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.53□□□□□ -1.52
USP6P35125 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.53□□□□□ -1.52
USP6P35125 snoU13.24-201ENST00000458998 104 ntBASIC5.53□□□□□ -1.52
USP6P35125 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
USP6P35125 MORF4L2P1-201ENST00000503761 858 ntBASIC5.53□□□□□ -1.52
USP6P35125 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.53□□□□□ -1.52
USP6P35125 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.53□□□□□ -1.52
USP6P35125 EIF4EP5-201ENST00000528228 640 ntBASIC5.53□□□□□ -1.52
USP6P35125 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.53□□□□□ -1.52
USP6P35125 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.53□□□□□ -1.52
USP6P35125 AC063950.1-201ENST00000552036 308 ntBASIC5.53□□□□□ -1.52
USP6P35125 MIR4472-2-201ENST00000582069 67 ntBASIC5.53□□□□□ -1.52
USP6P35125 QTRT1P1-201ENST00000604344 1078 ntBASIC5.53□□□□□ -1.52
USP6P35125 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.53□□□□□ -1.52
USP6P35125 AL138721.1-201ENST00000616756 179 ntBASIC5.53□□□□□ -1.52
USP6P35125 AC015908.5-201ENST00000623289 343 ntBASIC5.53□□□□□ -1.52
USP6P35125 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.53□□□□□ -1.52
USP6P35125 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP6P35125 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
USP6P35125 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.53□□□□□ -1.52
USP6P35125 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
USP6P35125 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.52□□□□□ -1.53
USP6P35125 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
USP6P35125 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
USP6P35125 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
USP6P35125 PCAT14-202ENST00000627127 3935 ntBASIC5.52□□□□□ -1.53
USP6P35125 OR4A15-201ENST00000314706 1035 ntBASIC5.52□□□□□ -1.53
USP6P35125 MIR7-3-201ENST00000384898 110 ntBASIC5.52□□□□□ -1.53
USP6P35125 RAB9AP3-201ENST00000412737 573 ntBASIC5.52□□□□□ -1.53
USP6P35125 AC091390.3-201ENST00000426478 338 ntBASIC5.52□□□□□ -1.53
USP6P35125 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.52□□□□□ -1.53
USP6P35125 RAB9AP1-201ENST00000449393 573 ntBASIC5.52□□□□□ -1.53
USP6P35125 RAD23BP3-201ENST00000454157 1152 ntBASIC5.52□□□□□ -1.53
USP6P35125 OR9M1P-201ENST00000459641 921 ntBASIC5.52□□□□□ -1.53
USP6P35125 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
USP6P35125 AC007991.1-201ENST00000522680 631 ntBASIC5.52□□□□□ -1.53
USP6P35125 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.52□□□□□ -1.53
USP6P35125 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.52□□□□□ -1.53
USP6P35125 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms