Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AC139713.2-210ENST00000641741 992 ntBASIC4.98□□□□□ -1.61
CAPN3P20807 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CAPN3P20807 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.98□□□□□ -1.61
CAPN3P20807 Z95331.1-201ENST00000623075 23112 ntBASIC4.98□□□□□ -1.61
CAPN3P20807 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.97□□□□□ -1.61
CAPN3P20807 AL627171.1-201ENST00000618845 1308 ntBASIC4.97□□□□□ -1.61
CAPN3P20807 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CAPN3P20807 AC120338.1-201ENST00000625074 1541 ntBASIC4.97□□□□□ -1.61
CAPN3P20807 HSPA8P18-201ENST00000439846 1928 ntBASIC4.97□□□□□ -1.61
CAPN3P20807 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CAPN3P20807 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CAPN3P20807 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CAPN3P20807 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CAPN3P20807 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CAPN3P20807 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.97□□□□□ -1.61
CAPN3P20807 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.97□□□□□ -1.61
CAPN3P20807 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CAPN3P20807 U8.4-201ENST00000363626 134 ntBASIC4.97□□□□□ -1.61
CAPN3P20807 SNORA56-201ENST00000383966 129 ntBASIC4.97□□□□□ -1.61
CAPN3P20807 HSPA8P15-201ENST00000401676 786 ntBASIC4.97□□□□□ -1.61
CAPN3P20807 MTCO2P31-201ENST00000402702 684 ntBASIC4.97□□□□□ -1.61
CAPN3P20807 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CAPN3P20807 AL035079.1-201ENST00000405210 287 ntBASIC4.97□□□□□ -1.61
CAPN3P20807 AL390316.1-201ENST00000406279 553 ntBASIC4.97□□□□□ -1.61
CAPN3P20807 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.97□□□□□ -1.61
CAPN3P20807 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.97□□□□□ -1.61
CAPN3P20807 LIPT1P1-201ENST00000415870 1186 ntBASIC4.97□□□□□ -1.61
CAPN3P20807 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.97□□□□□ -1.61
CAPN3P20807 TAF13P2-201ENST00000416876 286 ntBASIC4.97□□□□□ -1.61
CAPN3P20807 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.97□□□□□ -1.61
CAPN3P20807 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.97□□□□□ -1.61
CAPN3P20807 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.97□□□□□ -1.61
CAPN3P20807 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.97□□□□□ -1.61
CAPN3P20807 RPL35AP21-201ENST00000437667 333 ntBASIC4.97□□□□□ -1.61
CAPN3P20807 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.97□□□□□ -1.61
CAPN3P20807 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.97□□□□□ -1.61
CAPN3P20807 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.97□□□□□ -1.61
CAPN3P20807 AC073648.4-201ENST00000442655 781 ntBASIC4.97□□□□□ -1.61
CAPN3P20807 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.97□□□□□ -1.61
CAPN3P20807 RPL7P61-201ENST00000451721 751 ntBASIC4.97□□□□□ -1.61
CAPN3P20807 MTND2P39-201ENST00000457230 764 ntBASIC4.97□□□□□ -1.61
CAPN3P20807 GYG1P1-201ENST00000460864 698 ntBASIC4.97□□□□□ -1.61
CAPN3P20807 RPS20P21-201ENST00000466859 343 ntBASIC4.97□□□□□ -1.61
CAPN3P20807 AC005412.2-201ENST00000492004 341 ntBASIC4.97□□□□□ -1.61
CAPN3P20807 RN7SL591P-201ENST00000496150 292 ntBASIC4.97□□□□□ -1.61
CAPN3P20807 AC090638.1-201ENST00000498296 909 ntBASIC4.97□□□□□ -1.61
CAPN3P20807 AC093801.2-201ENST00000503966 1050 ntBASIC4.97□□□□□ -1.61
CAPN3P20807 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.97□□□□□ -1.61
CAPN3P20807 TCP11X3P-202ENST00000514289 1254 ntBASIC4.97□□□□□ -1.61
CAPN3P20807 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.97□□□□□ -1.61
CAPN3P20807 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.97□□□□□ -1.61
CAPN3P20807 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.97□□□□□ -1.61
CAPN3P20807 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CAPN3P20807 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.97□□□□□ -1.61
CAPN3P20807 PCNPP1-201ENST00000552501 511 ntBASIC4.97□□□□□ -1.61
CAPN3P20807 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.97□□□□□ -1.61
CAPN3P20807 RBM22P1-201ENST00000578589 1214 ntBASIC4.97□□□□□ -1.61
CAPN3P20807 HMGB2P1-201ENST00000591146 634 ntBASIC4.97□□□□□ -1.61
CAPN3P20807 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.97□□□□□ -1.61
CAPN3P20807 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.97□□□□□ -1.61
CAPN3P20807 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.97□□□□□ -1.61
CAPN3P20807 AC000068.2-201ENST00000608816 460 ntBASIC4.97□□□□□ -1.61
CAPN3P20807 AC015914.2-201ENST00000618167 288 ntBASIC4.97□□□□□ -1.61
CAPN3P20807 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.97□□□□□ -1.61
CAPN3P20807 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.97□□□□□ -1.61
CAPN3P20807 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.97□□□□□ -1.61
CAPN3P20807 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.97□□□□□ -1.61
CAPN3P20807 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CAPN3P20807 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CAPN3P20807 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.97□□□□□ -1.61
CAPN3P20807 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CAPN3P20807 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CAPN3P20807 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CAPN3P20807 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.97□□□□□ -1.61
CAPN3P20807 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
CAPN3P20807 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
CAPN3P20807 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.97□□□□□ -1.61
CAPN3P20807 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.97□□□□□ -1.61
CAPN3P20807 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.61
CAPN3P20807 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
CAPN3P20807 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CAPN3P20807 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.96□□□□□ -1.61
CAPN3P20807 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CAPN3P20807 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CAPN3P20807 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CAPN3P20807 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.96□□□□□ -1.62
CAPN3P20807 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CAPN3P20807 RNU6-236P-201ENST00000363886 106 ntBASIC4.96□□□□□ -1.62
CAPN3P20807 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.96□□□□□ -1.62
CAPN3P20807 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CAPN3P20807 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CAPN3P20807 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CAPN3P20807 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CAPN3P20807 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CAPN3P20807 RNA5SP487-201ENST00000410186 122 ntBASIC4.96□□□□□ -1.62
CAPN3P20807 AC009238.2-201ENST00000431026 355 ntBASIC4.96□□□□□ -1.62
CAPN3P20807 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.96□□□□□ -1.62
CAPN3P20807 HMGB1P45-201ENST00000435986 653 ntBASIC4.96□□□□□ -1.62
CAPN3P20807 AC234064.1-201ENST00000436312 247 ntBASIC4.96□□□□□ -1.62
CAPN3P20807 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms