Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC6.83□□□□□ -1.32
LMNB1P20700 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.83□□□□□ -1.32
LMNB1P20700 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC6.83□□□□□ -1.32
LMNB1P20700 RNU6-416P-201ENST00000516265 103 ntBASIC6.83□□□□□ -1.32
LMNB1P20700 CA1-215ENST00000522389 551 ntTSL 3 BASIC6.83□□□□□ -1.32
LMNB1P20700 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC6.83□□□□□ -1.32
LMNB1P20700 OR4A6P-201ENST00000534364 970 ntBASIC6.83□□□□□ -1.32
LMNB1P20700 AC005832.3-201ENST00000537929 631 ntBASIC6.83□□□□□ -1.32
LMNB1P20700 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC6.83□□□□□ -1.32
LMNB1P20700 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC6.83□□□□□ -1.32
LMNB1P20700 OR4H6P-201ENST00000563771 921 ntBASIC6.83□□□□□ -1.32
LMNB1P20700 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC6.83□□□□□ -1.32
LMNB1P20700 AC069307.1-201ENST00000602820 447 ntBASIC6.83□□□□□ -1.32
LMNB1P20700 AP001596.2-201ENST00000608410 312 ntBASIC6.83□□□□□ -1.32
LMNB1P20700 AC008498.1-201ENST00000613012 531 ntBASIC6.83□□□□□ -1.32
LMNB1P20700 AC135068.5-201ENST00000624197 983 ntBASIC6.83□□□□□ -1.32
LMNB1P20700 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC6.83□□□□□ -1.32
LMNB1P20700 AC068769.1-201ENST00000474767 2426 ntBASIC6.83□□□□□ -1.32
LMNB1P20700 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
LMNB1P20700 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
LMNB1P20700 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.83□□□□□ -1.32
LMNB1P20700 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
LMNB1P20700 HSPD1P8-201ENST00000400121 1658 ntBASIC6.83□□□□□ -1.32
LMNB1P20700 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
LMNB1P20700 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC6.83□□□□□ -1.32
LMNB1P20700 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.83□□□□□ -1.32
LMNB1P20700 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
LMNB1P20700 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.83□□□□□ -1.32
LMNB1P20700 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
LMNB1P20700 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LMNB1P20700 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
LMNB1P20700 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LMNB1P20700 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.82□□□□□ -1.32
LMNB1P20700 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LMNB1P20700 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.82□□□□□ -1.32
LMNB1P20700 AL121657.1-201ENST00000327215 531 ntBASIC6.82□□□□□ -1.32
LMNB1P20700 SNORA75-201ENST00000384158 137 ntBASIC6.82□□□□□ -1.32
LMNB1P20700 MIR192-201ENST00000384915 110 ntBASIC6.82□□□□□ -1.32
LMNB1P20700 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.82□□□□□ -1.32
LMNB1P20700 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC6.82□□□□□ -1.32
LMNB1P20700 AC105402.1-201ENST00000413336 545 ntBASIC6.82□□□□□ -1.32
LMNB1P20700 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC6.82□□□□□ -1.32
LMNB1P20700 MRPS36P1-201ENST00000421291 307 ntBASIC6.82□□□□□ -1.32
LMNB1P20700 AC093655.2-201ENST00000425735 631 ntBASIC6.82□□□□□ -1.32
LMNB1P20700 MTND1P30-201ENST00000441241 901 ntBASIC6.82□□□□□ -1.32
LMNB1P20700 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC6.82□□□□□ -1.32
LMNB1P20700 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LMNB1P20700 RPL31P44-201ENST00000447680 377 ntBASIC6.82□□□□□ -1.32
LMNB1P20700 OR6C5P-201ENST00000452388 923 ntBASIC6.82□□□□□ -1.32
LMNB1P20700 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC6.82□□□□□ -1.32
LMNB1P20700 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.82□□□□□ -1.32
LMNB1P20700 CFTRP1-201ENST00000456646 183 ntBASIC6.82□□□□□ -1.32
LMNB1P20700 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC6.82□□□□□ -1.32
LMNB1P20700 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
LMNB1P20700 GAPDHP39-201ENST00000481866 979 ntBASIC6.82□□□□□ -1.32
LMNB1P20700 PPP1R11P1-201ENST00000486095 376 ntBASIC6.82□□□□□ -1.32
LMNB1P20700 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.82□□□□□ -1.32
LMNB1P20700 SUMO2P4-201ENST00000504193 276 ntBASIC6.82□□□□□ -1.32
LMNB1P20700 CDC42P4-201ENST00000510507 563 ntBASIC6.82□□□□□ -1.32
LMNB1P20700 RNU6-941P-201ENST00000516346 108 ntBASIC6.82□□□□□ -1.32
LMNB1P20700 RN7SKP147-201ENST00000517154 244 ntBASIC6.82□□□□□ -1.32
LMNB1P20700 RAB9BP1-201ENST00000519581 626 ntBASIC6.82□□□□□ -1.32
LMNB1P20700 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC6.82□□□□□ -1.32
LMNB1P20700 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC6.82□□□□□ -1.32
LMNB1P20700 AC016957.1-201ENST00000534895 309 ntBASIC6.82□□□□□ -1.32
LMNB1P20700 AC092490.3-201ENST00000545370 572 ntBASIC6.82□□□□□ -1.32
LMNB1P20700 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC6.82□□□□□ -1.32
LMNB1P20700 AL121834.1-201ENST00000572284 509 ntBASIC6.82□□□□□ -1.32
LMNB1P20700 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC6.82□□□□□ -1.32
LMNB1P20700 AC008507.1-201ENST00000587506 734 ntBASIC6.82□□□□□ -1.32
LMNB1P20700 AC083899.3-201ENST00000603413 594 ntBASIC6.82□□□□□ -1.32
LMNB1P20700 AL136981.2-201ENST00000617319 734 ntBASIC6.82□□□□□ -1.32
LMNB1P20700 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
LMNB1P20700 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.82□□□□□ -1.32
LMNB1P20700 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.82□□□□□ -1.32
LMNB1P20700 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LMNB1P20700 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
LMNB1P20700 PROS2P-201ENST00000474651 1951 ntBASIC6.82□□□□□ -1.32
LMNB1P20700 AC093297.3-201ENST00000607056 2517 ntBASIC6.82□□□□□ -1.32
LMNB1P20700 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LMNB1P20700 AL034546.1-201ENST00000623740 3693 ntBASIC6.81□□□□□ -1.32
LMNB1P20700 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
LMNB1P20700 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.81□□□□□ -1.32
LMNB1P20700 CCT8P1-201ENST00000413611 1657 ntBASIC6.81□□□□□ -1.32
LMNB1P20700 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
LMNB1P20700 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
LMNB1P20700 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.81□□□□□ -1.32
LMNB1P20700 HSPA8P14-201ENST00000552265 1805 ntBASIC6.81□□□□□ -1.32
LMNB1P20700 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
LMNB1P20700 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.81□□□□□ -1.32
LMNB1P20700 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.81□□□□□ -1.32
LMNB1P20700 RN7SKP104-201ENST00000362605 328 ntBASIC6.81□□□□□ -1.32
LMNB1P20700 RNVU1-6-201ENST00000364688 164 ntBASIC6.81□□□□□ -1.32
LMNB1P20700 AL451142.1-201ENST00000375867 775 ntBASIC6.81□□□□□ -1.32
LMNB1P20700 RNU6-98P-201ENST00000384173 107 ntBASIC6.81□□□□□ -1.32
LMNB1P20700 RNU6-185P-201ENST00000384421 107 ntBASIC6.81□□□□□ -1.32
LMNB1P20700 U3.28-201ENST00000391249 210 ntBASIC6.81□□□□□ -1.32
LMNB1P20700 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.81□□□□□ -1.32
LMNB1P20700 AC092745.2-202ENST00000411880 369 ntBASIC6.81□□□□□ -1.32
LMNB1P20700 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms