Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC020916.2-201ENST00000591242 360 ntBASIC6.86□□□□□ -1.31
ERCC3P19447 AC104695.2-201ENST00000605056 775 ntBASIC6.86□□□□□ -1.31
ERCC3P19447 AC069304.2-201ENST00000605154 435 ntBASIC6.86□□□□□ -1.31
ERCC3P19447 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ERCC3P19447 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
ERCC3P19447 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.86□□□□□ -1.31
ERCC3P19447 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ERCC3P19447 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ERCC3P19447 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ERCC3P19447 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ERCC3P19447 AL034370.1-201ENST00000397254 1590 ntBASIC6.86□□□□□ -1.31
ERCC3P19447 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
ERCC3P19447 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
ERCC3P19447 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.85□□□□□ -1.31
ERCC3P19447 CYP1D1P-201ENST00000416662 1433 ntBASIC6.85□□□□□ -1.31
ERCC3P19447 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ERCC3P19447 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
ERCC3P19447 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.85□□□□□ -1.31
ERCC3P19447 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
ERCC3P19447 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ERCC3P19447 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ERCC3P19447 SNORD8-201ENST00000363915 110 ntBASIC6.85□□□□□ -1.31
ERCC3P19447 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
ERCC3P19447 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.85□□□□□ -1.31
ERCC3P19447 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ERCC3P19447 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ERCC3P19447 OR3A2-201ENST00000408891 1076 ntBASIC6.85□□□□□ -1.31
ERCC3P19447 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC6.85□□□□□ -1.31
ERCC3P19447 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.85□□□□□ -1.31
ERCC3P19447 AC127526.2-201ENST00000426436 775 ntBASIC6.85□□□□□ -1.31
ERCC3P19447 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC6.85□□□□□ -1.31
ERCC3P19447 AC073335.1-201ENST00000427776 363 ntBASIC6.85□□□□□ -1.31
ERCC3P19447 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.85□□□□□ -1.31
ERCC3P19447 UBE2FP3-201ENST00000436366 524 ntBASIC6.85□□□□□ -1.31
ERCC3P19447 LARP1BP3-201ENST00000437229 869 ntBASIC6.85□□□□□ -1.31
ERCC3P19447 AC002504.1-201ENST00000438281 691 ntBASIC6.85□□□□□ -1.31
ERCC3P19447 AL512286.1-201ENST00000439244 400 ntBASIC6.85□□□□□ -1.31
ERCC3P19447 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.85□□□□□ -1.31
ERCC3P19447 MTND2P20-201ENST00000440805 661 ntBASIC6.85□□□□□ -1.31
ERCC3P19447 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.85□□□□□ -1.31
ERCC3P19447 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC6.85□□□□□ -1.31
ERCC3P19447 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC6.85□□□□□ -1.31
ERCC3P19447 AC073909.1-201ENST00000447112 999 ntBASIC6.85□□□□□ -1.31
ERCC3P19447 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC6.85□□□□□ -1.31
ERCC3P19447 RPL26P28-201ENST00000451325 435 ntBASIC6.85□□□□□ -1.31
ERCC3P19447 DNAJC19P1-201ENST00000455312 319 ntBASIC6.85□□□□□ -1.31
ERCC3P19447 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC6.85□□□□□ -1.31
ERCC3P19447 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC6.85□□□□□ -1.31
ERCC3P19447 ARL2BPP5-201ENST00000523141 481 ntBASIC6.85□□□□□ -1.31
ERCC3P19447 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.85□□□□□ -1.31
ERCC3P19447 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC6.85□□□□□ -1.31
ERCC3P19447 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC6.85□□□□□ -1.31
ERCC3P19447 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC6.85□□□□□ -1.31
ERCC3P19447 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.85□□□□□ -1.31
ERCC3P19447 KPNA2P3-201ENST00000584190 848 ntBASIC6.85□□□□□ -1.31
ERCC3P19447 AC123786.2-201ENST00000603459 275 ntBASIC6.85□□□□□ -1.31
ERCC3P19447 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
ERCC3P19447 AC004492.1-201ENST00000607036 742 ntBASIC6.85□□□□□ -1.31
ERCC3P19447 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ERCC3P19447 AC243773.3-201ENST00000613270 256 ntBASIC6.85□□□□□ -1.31
ERCC3P19447 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ERCC3P19447 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ERCC3P19447 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.85□□□□□ -1.31
ERCC3P19447 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ERCC3P19447 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.85□□□□□ -1.31
ERCC3P19447 AC027514.1-201ENST00000588561 1603 ntBASIC6.85□□□□□ -1.31
ERCC3P19447 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
ERCC3P19447 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
ERCC3P19447 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
ERCC3P19447 SAMMSON-213ENST00000641336 1521 ntBASIC6.85□□□□□ -1.31
ERCC3P19447 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.85□□□□□ -1.31
ERCC3P19447 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
ERCC3P19447 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.85□□□□□ -1.31
ERCC3P19447 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
ERCC3P19447 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
ERCC3P19447 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
ERCC3P19447 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.84□□□□□ -1.31
ERCC3P19447 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.84□□□□□ -1.31
ERCC3P19447 MTND4P16-201ENST00000466108 1367 ntBASIC6.84□□□□□ -1.31
ERCC3P19447 AC015799.1-201ENST00000622996 3122 ntBASIC6.84□□□□□ -1.31
ERCC3P19447 AC027228.2-201ENST00000567141 2154 ntBASIC6.84□□□□□ -1.31
ERCC3P19447 AC006484.1-201ENST00000435086 1884 ntBASIC6.84□□□□□ -1.31
ERCC3P19447 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
ERCC3P19447 SNORA64.1-201ENST00000362600 132 ntBASIC6.84□□□□□ -1.31
ERCC3P19447 RNU6-251P-201ENST00000363235 104 ntBASIC6.84□□□□□ -1.31
ERCC3P19447 RNU6-501P-201ENST00000364072 100 ntBASIC6.84□□□□□ -1.31
ERCC3P19447 RNA5SP394-201ENST00000364216 119 ntBASIC6.84□□□□□ -1.31
ERCC3P19447 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC6.84□□□□□ -1.31
ERCC3P19447 RNU6-723P-201ENST00000383973 107 ntBASIC6.84□□□□□ -1.31
ERCC3P19447 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.84□□□□□ -1.31
ERCC3P19447 HMGB1P20-201ENST00000402555 677 ntBASIC6.84□□□□□ -1.31
ERCC3P19447 AC073264.1-201ENST00000411508 416 ntBASIC6.84□□□□□ -1.31
ERCC3P19447 ATG4AP1-201ENST00000416893 538 ntBASIC6.84□□□□□ -1.31
ERCC3P19447 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.84□□□□□ -1.31
ERCC3P19447 AC008280.1-201ENST00000418851 412 ntBASIC6.84□□□□□ -1.31
ERCC3P19447 RPS17P17-201ENST00000419392 409 ntBASIC6.84□□□□□ -1.31
ERCC3P19447 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC6.84□□□□□ -1.31
ERCC3P19447 USP9YP14-201ENST00000430663 563 ntBASIC6.84□□□□□ -1.31
ERCC3P19447 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC6.84□□□□□ -1.31
ERCC3P19447 AL022237.1-201ENST00000446663 358 ntBASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms