Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.64□□□□□ -1.51
ATF4P18848 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC5.64□□□□□ -1.51
ATF4P18848 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.64□□□□□ -1.51
ATF4P18848 AP001120.4-201ENST00000590231 108 ntBASIC5.64□□□□□ -1.51
ATF4P18848 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.64□□□□□ -1.51
ATF4P18848 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.64□□□□□ -1.51
ATF4P18848 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.64□□□□□ -1.51
ATF4P18848 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.64□□□□□ -1.51
ATF4P18848 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.64□□□□□ -1.51
ATF4P18848 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.64□□□□□ -1.51
ATF4P18848 AL359880.1-201ENST00000621879 266 ntBASIC5.64□□□□□ -1.51
ATF4P18848 SNORA43.5-201ENST00000631270 138 ntBASIC5.64□□□□□ -1.51
ATF4P18848 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.64□□□□□ -1.51
ATF4P18848 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
ATF4P18848 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
ATF4P18848 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.64□□□□□ -1.51
ATF4P18848 Z95114.1-201ENST00000624264 14574 ntBASIC5.64□□□□□ -1.51
ATF4P18848 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATF4P18848 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.64□□□□□ -1.51
ATF4P18848 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATF4P18848 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATF4P18848 AC010624.4-201ENST00000597606 1351 ntBASIC5.64□□□□□ -1.51
ATF4P18848 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.64□□□□□ -1.51
ATF4P18848 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
ATF4P18848 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.64□□□□□ -1.51
ATF4P18848 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATF4P18848 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATF4P18848 KARSP2-201ENST00000415696 1639 ntBASIC5.63□□□□□ -1.51
ATF4P18848 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATF4P18848 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATF4P18848 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATF4P18848 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATF4P18848 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.63□□□□□ -1.51
ATF4P18848 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATF4P18848 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
ATF4P18848 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
ATF4P18848 RNA5SP378-201ENST00000363646 120 ntBASIC5.63□□□□□ -1.51
ATF4P18848 RNU6-359P-201ENST00000365466 108 ntBASIC5.63□□□□□ -1.51
ATF4P18848 RN7SKP292-201ENST00000365522 317 ntBASIC5.63□□□□□ -1.51
ATF4P18848 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATF4P18848 U3.20-201ENST00000390909 217 ntBASIC5.63□□□□□ -1.51
ATF4P18848 RPL23AP32-201ENST00000395315 459 ntBASIC5.63□□□□□ -1.51
ATF4P18848 RPL7-203ENST00000396466 762 ntTSL 3 BASIC5.63□□□□□ -1.51
ATF4P18848 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC5.63□□□□□ -1.51
ATF4P18848 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.63□□□□□ -1.51
ATF4P18848 SNORA2C-201ENST00000408564 137 ntBASIC5.63□□□□□ -1.51
ATF4P18848 RN7SKP285-201ENST00000410137 318 ntBASIC5.63□□□□□ -1.51
ATF4P18848 RN7SKP235-201ENST00000410662 305 ntBASIC5.63□□□□□ -1.51
ATF4P18848 AC078974.1-201ENST00000411597 223 ntBASIC5.63□□□□□ -1.51
ATF4P18848 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.63□□□□□ -1.51
ATF4P18848 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC5.63□□□□□ -1.51
ATF4P18848 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.63□□□□□ -1.51
ATF4P18848 AC245052.5-201ENST00000416320 649 ntBASIC5.63□□□□□ -1.51
ATF4P18848 GEMIN2P2-201ENST00000418195 715 ntBASIC5.63□□□□□ -1.51
ATF4P18848 AC013429.2-201ENST00000418798 781 ntBASIC5.63□□□□□ -1.51
ATF4P18848 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC5.63□□□□□ -1.51
ATF4P18848 AL138785.1-201ENST00000425821 331 ntBASIC5.63□□□□□ -1.51
ATF4P18848 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC5.63□□□□□ -1.51
ATF4P18848 LIN28AP2-201ENST00000445283 458 ntBASIC5.63□□□□□ -1.51
ATF4P18848 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ATF4P18848 AL136380.1-201ENST00000447970 162 ntBASIC5.63□□□□□ -1.51
ATF4P18848 TCEAL4P1-201ENST00000453620 588 ntBASIC5.63□□□□□ -1.51
ATF4P18848 C1DP4-201ENST00000455429 424 ntBASIC5.63□□□□□ -1.51
ATF4P18848 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.63□□□□□ -1.51
ATF4P18848 Z83838.1-202ENST00000456225 839 ntBASIC5.63□□□□□ -1.51
ATF4P18848 AL359385.1-201ENST00000456509 365 ntBASIC5.63□□□□□ -1.51
ATF4P18848 AC016489.1-201ENST00000461109 375 ntBASIC5.63□□□□□ -1.51
ATF4P18848 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
ATF4P18848 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5.63□□□□□ -1.51
ATF4P18848 AC084878.1-201ENST00000480555 648 ntBASIC5.63□□□□□ -1.51
ATF4P18848 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.63□□□□□ -1.51
ATF4P18848 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.63□□□□□ -1.51
ATF4P18848 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.63□□□□□ -1.51
ATF4P18848 COX7A2P2-201ENST00000505291 250 ntBASIC5.63□□□□□ -1.51
ATF4P18848 AC116353.2-201ENST00000505332 712 ntBASIC5.63□□□□□ -1.51
ATF4P18848 AC093824.1-201ENST00000508796 343 ntBASIC5.63□□□□□ -1.51
ATF4P18848 AC005798.1-201ENST00000513715 387 ntBASIC5.63□□□□□ -1.51
ATF4P18848 Vault.3-201ENST00000516676 95 ntBASIC5.63□□□□□ -1.51
ATF4P18848 OR8Q1P-201ENST00000526467 655 ntBASIC5.63□□□□□ -1.51
ATF4P18848 AP000907.2-201ENST00000530827 353 ntBASIC5.63□□□□□ -1.51
ATF4P18848 OR5F2P-201ENST00000532761 941 ntBASIC5.63□□□□□ -1.51
ATF4P18848 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.63□□□□□ -1.51
ATF4P18848 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC5.63□□□□□ -1.51
ATF4P18848 AC123904.2-201ENST00000548059 300 ntBASIC5.63□□□□□ -1.51
ATF4P18848 MYL6-211ENST00000548580 528 ntTSL 2 BASIC5.63□□□□□ -1.51
ATF4P18848 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.63□□□□□ -1.51
ATF4P18848 AC007494.1-201ENST00000562293 760 ntBASIC5.63□□□□□ -1.51
ATF4P18848 BGLT3-201ENST00000564523 994 ntBASIC5.63□□□□□ -1.51
ATF4P18848 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC5.63□□□□□ -1.51
ATF4P18848 AC091304.5-201ENST00000568969 158 ntBASIC5.63□□□□□ -1.51
ATF4P18848 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
ATF4P18848 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.63□□□□□ -1.51
ATF4P18848 AP005119.1-201ENST00000580956 292 ntBASIC5.63□□□□□ -1.51
ATF4P18848 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.63□□□□□ -1.51
ATF4P18848 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.63□□□□□ -1.51
ATF4P18848 MEMO1P5-201ENST00000604810 406 ntBASIC5.63□□□□□ -1.51
ATF4P18848 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC5.63□□□□□ -1.51
ATF4P18848 AC037198.3-201ENST00000616754 526 ntBASIC5.63□□□□□ -1.51
ATF4P18848 AC009268.2-201ENST00000621925 457 ntBASIC5.63□□□□□ -1.51
ATF4P18848 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms