Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 MIR4436B1-201ENST00000583272 91 ntBASIC3.75□□□□□ -1.81
ATF1P18846 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.75□□□□□ -1.81
ATF1P18846 AP001160.4-201ENST00000596971 382 ntBASIC3.75□□□□□ -1.81
ATF1P18846 AC008536.1-201ENST00000602872 669 ntBASIC3.75□□□□□ -1.81
ATF1P18846 AC012213.4-201ENST00000606457 354 ntBASIC3.75□□□□□ -1.81
ATF1P18846 AC100847.1-201ENST00000611316 481 ntBASIC3.75□□□□□ -1.81
ATF1P18846 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
ATF1P18846 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.75□□□□□ -1.81
ATF1P18846 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.75□□□□□ -1.81
ATF1P18846 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
ATF1P18846 AC103858.2-201ENST00000621471 543 ntBASIC3.75□□□□□ -1.81
ATF1P18846 FP325313.1-201ENST00000638228 703 ntBASIC3.75□□□□□ -1.81
ATF1P18846 AC090017.1-201ENST00000548612 1779 ntBASIC3.75□□□□□ -1.81
ATF1P18846 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.75□□□□□ -1.81
ATF1P18846 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
ATF1P18846 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.75□□□□□ -1.81
ATF1P18846 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
ATF1P18846 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.75□□□□□ -1.81
ATF1P18846 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
ATF1P18846 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
ATF1P18846 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
ATF1P18846 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
ATF1P18846 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
ATF1P18846 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.75□□□□□ -1.81
ATF1P18846 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
ATF1P18846 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.74□□□□□ -1.81
ATF1P18846 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ATF1P18846 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
ATF1P18846 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
ATF1P18846 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.74□□□□□ -1.81
ATF1P18846 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ATF1P18846 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ATF1P18846 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
ATF1P18846 RNA5SP502-201ENST00000362694 119 ntBASIC3.74□□□□□ -1.81
ATF1P18846 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.74□□□□□ -1.81
ATF1P18846 SNORA70F-201ENST00000384142 135 ntBASIC3.74□□□□□ -1.81
ATF1P18846 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
ATF1P18846 AL034403.1-201ENST00000399414 885 ntBASIC3.74□□□□□ -1.81
ATF1P18846 AC097374.1-203ENST00000400783 485 ntBASIC3.74□□□□□ -1.81
ATF1P18846 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.74□□□□□ -1.81
ATF1P18846 MTCYBP7-201ENST00000419540 1134 ntBASIC3.74□□□□□ -1.81
ATF1P18846 RPL7AP25-201ENST00000423357 805 ntBASIC3.74□□□□□ -1.81
ATF1P18846 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.74□□□□□ -1.81
ATF1P18846 SEC63P1-201ENST00000425785 1258 ntBASIC3.74□□□□□ -1.81
ATF1P18846 AL158073.1-201ENST00000426848 1104 ntBASIC3.74□□□□□ -1.81
ATF1P18846 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.74□□□□□ -1.81
ATF1P18846 NDUFA5P1-201ENST00000433858 341 ntBASIC3.74□□□□□ -1.81
ATF1P18846 AC093716.1-201ENST00000435923 377 ntBASIC3.74□□□□□ -1.81
ATF1P18846 RPL12P46-201ENST00000436610 195 ntBASIC3.74□□□□□ -1.81
ATF1P18846 CACYBPP1-201ENST00000438592 684 ntBASIC3.74□□□□□ -1.81
ATF1P18846 RPL7P22-201ENST00000466005 733 ntBASIC3.74□□□□□ -1.81
ATF1P18846 RPL35AP15-201ENST00000468042 339 ntBASIC3.74□□□□□ -1.81
ATF1P18846 RPL23AP71-201ENST00000470966 469 ntBASIC3.74□□□□□ -1.81
ATF1P18846 AC083982.1-201ENST00000485679 344 ntBASIC3.74□□□□□ -1.81
ATF1P18846 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.74□□□□□ -1.81
ATF1P18846 RNU4-18P-201ENST00000516751 149 ntBASIC3.74□□□□□ -1.81
ATF1P18846 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
ATF1P18846 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.74□□□□□ -1.81
ATF1P18846 AC068446.3-201ENST00000555285 382 ntBASIC3.74□□□□□ -1.81
ATF1P18846 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC3.74□□□□□ -1.81
ATF1P18846 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.74□□□□□ -1.81
ATF1P18846 AC079587.1-201ENST00000603846 277 ntBASIC3.74□□□□□ -1.81
ATF1P18846 AC007620.3-201ENST00000608131 497 ntBASIC3.74□□□□□ -1.81
ATF1P18846 AC211433.2-201ENST00000608433 387 ntBASIC3.74□□□□□ -1.81
ATF1P18846 AC007546.1-201ENST00000619452 559 ntBASIC3.74□□□□□ -1.81
ATF1P18846 AP005019.3-201ENST00000620418 560 ntBASIC3.74□□□□□ -1.81
ATF1P18846 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC3.74□□□□□ -1.81
ATF1P18846 WDR75-207ENST00000631047 270 ntTSL 5 BASIC3.74□□□□□ -1.81
ATF1P18846 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
ATF1P18846 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
ATF1P18846 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ATF1P18846 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ATF1P18846 AP001486.2-201ENST00000561652 5113 ntBASIC3.74□□□□□ -1.81
ATF1P18846 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ATF1P18846 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
ATF1P18846 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.73□□□□□ -1.81
ATF1P18846 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.73□□□□□ -1.81
ATF1P18846 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.73□□□□□ -1.81
ATF1P18846 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
ATF1P18846 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
ATF1P18846 AC092079.1-201ENST00000558620 1985 ntBASIC3.73□□□□□ -1.81
ATF1P18846 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
ATF1P18846 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.73□□□□□ -1.81
ATF1P18846 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
ATF1P18846 ZNF603P-201ENST00000405613 487 ntBASIC3.73□□□□□ -1.81
ATF1P18846 SNORA3C-201ENST00000408792 125 ntBASIC3.73□□□□□ -1.81
ATF1P18846 RN7SKP278-201ENST00000410504 342 ntBASIC3.73□□□□□ -1.81
ATF1P18846 RNU6-603P-201ENST00000411403 107 ntBASIC3.73□□□□□ -1.81
ATF1P18846 RPL6P29-201ENST00000414863 865 ntBASIC3.73□□□□□ -1.81
ATF1P18846 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.73□□□□□ -1.81
ATF1P18846 AC010740.1-201ENST00000417035 684 ntBASIC3.73□□□□□ -1.81
ATF1P18846 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC3.73□□□□□ -1.81
ATF1P18846 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.73□□□□□ -1.81
ATF1P18846 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.73□□□□□ -1.81
ATF1P18846 RPL12P3-201ENST00000440080 396 ntBASIC3.73□□□□□ -1.81
ATF1P18846 TPTE2P3-201ENST00000441562 1189 ntBASIC3.73□□□□□ -1.81
ATF1P18846 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.73□□□□□ -1.81
ATF1P18846 AL354710.1-201ENST00000453641 246 ntBASIC3.73□□□□□ -1.81
ATF1P18846 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.73□□□□□ -1.81
ATF1P18846 SEPT7P6-201ENST00000469999 1143 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms