Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 S100A13-202ENST00000392622 547 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
CD44P16070 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
CD44P16070 AL357075.1-201ENST00000404107 726 ntBASIC8.52□□□□□ -1.05
CD44P16070 AL023284.3-201ENST00000407767 334 ntBASIC8.52□□□□□ -1.05
CD44P16070 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CD44P16070 PGAM1P3-201ENST00000420790 565 ntBASIC8.52□□□□□ -1.05
CD44P16070 MTATP6P4-201ENST00000427725 675 ntBASIC8.52□□□□□ -1.05
CD44P16070 LINC00350-201ENST00000438640 422 ntTSL 5 BASIC8.52□□□□□ -1.05
CD44P16070 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC8.52□□□□□ -1.05
CD44P16070 NUTF2P7-201ENST00000453086 375 ntBASIC8.52□□□□□ -1.05
CD44P16070 RN7SL335P-201ENST00000482790 304 ntBASIC8.52□□□□□ -1.05
CD44P16070 RN7SL569P-201ENST00000494652 288 ntBASIC8.52□□□□□ -1.05
CD44P16070 AL031864.2-201ENST00000498507 350 ntBASIC8.52□□□□□ -1.05
CD44P16070 AL445187.1-201ENST00000502685 260 ntBASIC8.52□□□□□ -1.05
CD44P16070 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC8.52□□□□□ -1.05
CD44P16070 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC8.52□□□□□ -1.05
CD44P16070 SCARNA20.1-201ENST00000516009 138 ntBASIC8.52□□□□□ -1.05
CD44P16070 TMEM132D-AS1-204ENST00000537367 531 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CD44P16070 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC8.52□□□□□ -1.05
CD44P16070 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
CD44P16070 AC005230.1-201ENST00000555418 285 ntBASIC8.52□□□□□ -1.05
CD44P16070 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC8.52□□□□□ -1.05
CD44P16070 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC8.52□□□□□ -1.05
CD44P16070 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC8.52□□□□□ -1.05
CD44P16070 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC8.52□□□□□ -1.05
CD44P16070 NUDT13-208ENST00000617744 928 ntTSL 5 BASIC8.52□□□□□ -1.05
CD44P16070 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC8.52□□□□□ -1.05
CD44P16070 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC8.52□□□□□ -1.05
CD44P16070 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC8.52□□□□□ -1.05
CD44P16070 SMG7-216ENST00000638826 219 ntTSL 2 BASIC8.52□□□□□ -1.05
CD44P16070 AL596275.2-204ENST00000641628 552 ntBASIC8.52□□□□□ -1.05
CD44P16070 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CD44P16070 CD36-214ENST00000447544 2298 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
CD44P16070 FLJ42393-201ENST00000623801 2270 ntBASIC8.52□□□□□ -1.05
CD44P16070 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
CD44P16070 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CD44P16070 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CD44P16070 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CD44P16070 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CD44P16070 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CD44P16070 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
CD44P16070 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC8.52□□□□□ -1.05
CD44P16070 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CD44P16070 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
CD44P16070 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
CD44P16070 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC8.51□□□□□ -1.05
CD44P16070 ALB-209ENST00000503124 1741 ntTSL 5 BASIC8.51□□□□□ -1.05
CD44P16070 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CD44P16070 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC8.51□□□□□ -1.05
CD44P16070 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CD44P16070 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
CD44P16070 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
CD44P16070 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CD44P16070 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CD44P16070 APP-206ENST00000359726 3294 ntTSL 2 BASIC8.51□□□□□ -1.05
CD44P16070 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC8.51□□□□□ -1.05
CD44P16070 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CD44P16070 RNA5SP71-201ENST00000362967 126 ntBASIC8.51□□□□□ -1.05
CD44P16070 Y_RNA.218-201ENST00000364218 104 ntBASIC8.51□□□□□ -1.05
CD44P16070 SNORD116-14-201ENST00000383894 92 ntBASIC8.51□□□□□ -1.05
CD44P16070 SNORD116-17-201ENST00000383929 92 ntBASIC8.51□□□□□ -1.05
CD44P16070 SNORD116-15-201ENST00000384445 92 ntBASIC8.51□□□□□ -1.05
CD44P16070 SNORD116-20-201ENST00000384529 92 ntBASIC8.51□□□□□ -1.05
CD44P16070 SNORD116-19-201ENST00000384729 92 ntBASIC8.51□□□□□ -1.05
CD44P16070 STAG3L1-201ENST00000404291 496 ntTSL 3 BASIC8.51□□□□□ -1.05
CD44P16070 ZEB2-AS1-201ENST00000421083 453 ntTSL 2 BASIC8.51□□□□□ -1.05
CD44P16070 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC8.51□□□□□ -1.05
CD44P16070 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC8.51□□□□□ -1.05
CD44P16070 AL035551.1-201ENST00000446931 348 ntBASIC8.51□□□□□ -1.05
CD44P16070 RPL4P2-201ENST00000447259 1282 ntBASIC8.51□□□□□ -1.05
CD44P16070 AC239798.1-201ENST00000449024 1176 ntBASIC8.51□□□□□ -1.05
CD44P16070 AL590326.1-201ENST00000460857 334 ntBASIC8.51□□□□□ -1.05
CD44P16070 AC117503.1-201ENST00000472241 394 ntBASIC8.51□□□□□ -1.05
CD44P16070 FTH1P23-201ENST00000492727 550 ntBASIC8.51□□□□□ -1.05
CD44P16070 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC8.51□□□□□ -1.05
CD44P16070 AC104806.1-201ENST00000508720 308 ntBASIC8.51□□□□□ -1.05
CD44P16070 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC8.51□□□□□ -1.05
CD44P16070 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
CD44P16070 GZMB-205ENST00000526004 819 ntTSL 3 BASIC8.51□□□□□ -1.05
CD44P16070 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC8.51□□□□□ -1.05
CD44P16070 PLA2G1B-203ENST00000549767 562 ntTSL 2 BASIC8.51□□□□□ -1.05
CD44P16070 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC8.51□□□□□ -1.05
CD44P16070 AC136932.1-201ENST00000574771 208 ntBASIC8.51□□□□□ -1.05
CD44P16070 DTNA-220ENST00000590831 847 ntTSL 2 BASIC8.51□□□□□ -1.05
CD44P16070 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC8.51□□□□□ -1.05
CD44P16070 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC8.51□□□□□ -1.05
CD44P16070 ELOCP5-201ENST00000604924 333 ntBASIC8.51□□□□□ -1.05
CD44P16070 AL080312.2-201ENST00000613001 630 ntBASIC8.51□□□□□ -1.05
CD44P16070 AC245028.3-201ENST00000618197 285 ntBASIC8.51□□□□□ -1.05
CD44P16070 BANCR-201ENST00000624238 473 ntTSL 2 BASIC8.51□□□□□ -1.05
CD44P16070 PGAM1P5-203ENST00000626376 313 ntTSL 5 BASIC8.51□□□□□ -1.05
CD44P16070 AC026950.2-201ENST00000633456 470 ntTSL 3 BASIC8.51□□□□□ -1.05
CD44P16070 AC055839.1-201ENST00000634467 498 ntBASIC8.51□□□□□ -1.05
CD44P16070 AC010653.3-201ENST00000635332 232 ntBASIC8.51□□□□□ -1.05
CD44P16070 U6.101-201ENST00000637707 76 ntBASIC8.51□□□□□ -1.05
CD44P16070 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CD44P16070 CAP1P2-201ENST00000417455 1409 ntBASIC8.51□□□□□ -1.05
CD44P16070 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CD44P16070 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CD44P16070 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms