Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
RB1P06400 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
RB1P06400 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RB1P06400 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
RB1P06400 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.09□□□□□ -1.59
RB1P06400 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.09□□□□□ -1.59
RB1P06400 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
RB1P06400 OR4K17-201ENST00000315543 1032 ntBASIC5.09□□□□□ -1.59
RB1P06400 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
RB1P06400 RNU6-178P-201ENST00000384631 104 ntBASIC5.09□□□□□ -1.59
RB1P06400 MIR142-201ENST00000384835 87 ntBASIC5.09□□□□□ -1.59
RB1P06400 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.09□□□□□ -1.59
RB1P06400 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
RB1P06400 OR6C69P-201ENST00000394268 893 ntBASIC5.09□□□□□ -1.59
RB1P06400 AL591848.1-201ENST00000413092 322 ntBASIC5.09□□□□□ -1.59
RB1P06400 AC009302.1-201ENST00000417147 390 ntBASIC5.09□□□□□ -1.59
RB1P06400 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.09□□□□□ -1.59
RB1P06400 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.09□□□□□ -1.59
RB1P06400 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.09□□□□□ -1.59
RB1P06400 AC005189.1-201ENST00000431286 310 ntBASIC5.09□□□□□ -1.59
RB1P06400 RPS17P8-201ENST00000434525 335 ntBASIC5.09□□□□□ -1.59
RB1P06400 SDR42E1P3-201ENST00000438345 502 ntBASIC5.09□□□□□ -1.59
RB1P06400 AL158053.1-201ENST00000441503 453 ntBASIC5.09□□□□□ -1.59
RB1P06400 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.09□□□□□ -1.59
RB1P06400 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.09□□□□□ -1.59
RB1P06400 RN7SL517P-201ENST00000462240 305 ntBASIC5.09□□□□□ -1.59
RB1P06400 CYCSP20-201ENST00000473154 315 ntBASIC5.09□□□□□ -1.59
RB1P06400 AC023424.1-201ENST00000496058 459 ntBASIC5.09□□□□□ -1.59
RB1P06400 RN7SL558P-201ENST00000497468 299 ntBASIC5.09□□□□□ -1.59
RB1P06400 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RB1P06400 NPM1P6-201ENST00000521088 871 ntBASIC5.09□□□□□ -1.59
RB1P06400 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.09□□□□□ -1.59
RB1P06400 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.09□□□□□ -1.59
RB1P06400 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.09□□□□□ -1.59
RB1P06400 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.09□□□□□ -1.59
RB1P06400 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.09□□□□□ -1.59
RB1P06400 AC115286.1-201ENST00000604298 434 ntBASIC5.09□□□□□ -1.59
RB1P06400 AL109618.2-201ENST00000605527 211 ntBASIC5.09□□□□□ -1.59
RB1P06400 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.09□□□□□ -1.59
RB1P06400 AC090525.3-201ENST00000605601 189 ntBASIC5.09□□□□□ -1.59
RB1P06400 AC004232.3-201ENST00000622977 525 ntBASIC5.09□□□□□ -1.59
RB1P06400 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.09□□□□□ -1.59
RB1P06400 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.09□□□□□ -1.59
RB1P06400 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RB1P06400 TLK1P1-201ENST00000456760 2440 ntBASIC5.09□□□□□ -1.59
RB1P06400 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
RB1P06400 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
RB1P06400 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
RB1P06400 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.09□□□□□ -1.6
RB1P06400 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
RB1P06400 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.08□□□□□ -1.6
RB1P06400 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RB1P06400 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
RB1P06400 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.08□□□□□ -1.6
RB1P06400 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
RB1P06400 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.08□□□□□ -1.6
RB1P06400 RAD17P1-201ENST00000418130 2042 ntBASIC5.08□□□□□ -1.6
RB1P06400 AL450326.2-201ENST00000421913 1962 ntBASIC5.08□□□□□ -1.6
RB1P06400 ZNF137P-201ENST00000456718 1920 ntBASIC5.08□□□□□ -1.6
RB1P06400 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
RB1P06400 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RB1P06400 NCSTNP1-201ENST00000406229 144 ntBASIC5.08□□□□□ -1.6
RB1P06400 UQCRFS1P3-201ENST00000407697 385 ntBASIC5.08□□□□□ -1.6
RB1P06400 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.08□□□□□ -1.6
RB1P06400 RN7SKP247-201ENST00000411094 308 ntBASIC5.08□□□□□ -1.6
RB1P06400 PCNPP4-201ENST00000414817 517 ntBASIC5.08□□□□□ -1.6
RB1P06400 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RB1P06400 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.08□□□□□ -1.6
RB1P06400 RPS27AP12-201ENST00000429552 465 ntBASIC5.08□□□□□ -1.6
RB1P06400 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.08□□□□□ -1.6
RB1P06400 KCTD10P1-201ENST00000434203 625 ntBASIC5.08□□□□□ -1.6
RB1P06400 H2AFZP5-201ENST00000446960 382 ntBASIC5.08□□□□□ -1.6
RB1P06400 AC092685.1-201ENST00000447960 1243 ntBASIC5.08□□□□□ -1.6
RB1P06400 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.08□□□□□ -1.6
RB1P06400 PRPF38AP1-201ENST00000451976 933 ntBASIC5.08□□□□□ -1.6
RB1P06400 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.08□□□□□ -1.6
RB1P06400 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.08□□□□□ -1.6
RB1P06400 RPL21P47-201ENST00000483696 477 ntBASIC5.08□□□□□ -1.6
RB1P06400 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.08□□□□□ -1.6
RB1P06400 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.08□□□□□ -1.6
RB1P06400 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.08□□□□□ -1.6
RB1P06400 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RB1P06400 AP001781.1-201ENST00000530977 207 ntBASIC5.08□□□□□ -1.6
RB1P06400 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.08□□□□□ -1.6
RB1P06400 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.08□□□□□ -1.6
RB1P06400 AC093227.2-201ENST00000589357 285 ntBASIC5.08□□□□□ -1.6
RB1P06400 AC026741.1-201ENST00000605892 482 ntBASIC5.08□□□□□ -1.6
RB1P06400 AC112503.2-201ENST00000609005 552 ntBASIC5.08□□□□□ -1.6
RB1P06400 uc_338.9-201ENST00000617424 182 ntBASIC5.08□□□□□ -1.6
RB1P06400 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.08□□□□□ -1.6
RB1P06400 AC083865.1-201ENST00000636634 831 ntBASIC5.08□□□□□ -1.6
RB1P06400 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
RB1P06400 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RB1P06400 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RB1P06400 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
RB1P06400 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.08□□□□□ -1.6
RB1P06400 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RB1P06400 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.08□□□□□ -1.6
RB1P06400 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
RB1P06400 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 205.8 ms