Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 OR11H3P-201ENST00000554547 982 ntBASIC5.22□□□□□ -1.57
PROM1O43490 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC5.22□□□□□ -1.57
PROM1O43490 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC5.22□□□□□ -1.57
PROM1O43490 MTCO1P40-201ENST00000574371 625 ntBASIC5.22□□□□□ -1.57
PROM1O43490 MIR4700-201ENST00000578311 74 ntBASIC5.22□□□□□ -1.57
PROM1O43490 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.22□□□□□ -1.57
PROM1O43490 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.22□□□□□ -1.57
PROM1O43490 AP001981.2-201ENST00000603241 418 ntBASIC5.22□□□□□ -1.57
PROM1O43490 AC104695.2-201ENST00000605056 775 ntBASIC5.22□□□□□ -1.57
PROM1O43490 RN7SKP299-201ENST00000606679 301 ntBASIC5.22□□□□□ -1.57
PROM1O43490 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.22□□□□□ -1.57
PROM1O43490 AL133243.1-201ENST00000614487 366 ntBASIC5.22□□□□□ -1.57
PROM1O43490 AK6-205ENST00000618980 483 ntTSL 2 BASIC5.22□□□□□ -1.57
PROM1O43490 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.22□□□□□ -1.57
PROM1O43490 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
PROM1O43490 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.22□□□□□ -1.57
PROM1O43490 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.22□□□□□ -1.57
PROM1O43490 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.22□□□□□ -1.57
PROM1O43490 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.22□□□□□ -1.57
PROM1O43490 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PROM1O43490 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PROM1O43490 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PROM1O43490 AC093536.2-201ENST00000565257 1406 ntBASIC5.22□□□□□ -1.57
PROM1O43490 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.22□□□□□ -1.57
PROM1O43490 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
PROM1O43490 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PROM1O43490 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PROM1O43490 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
PROM1O43490 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
PROM1O43490 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.21□□□□□ -1.57
PROM1O43490 SEC63P2-201ENST00000503863 1939 ntBASIC5.21□□□□□ -1.57
PROM1O43490 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.21□□□□□ -1.58
PROM1O43490 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PROM1O43490 AC079097.1-201ENST00000512187 1399 ntBASIC5.21□□□□□ -1.58
PROM1O43490 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
PROM1O43490 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.21□□□□□ -1.58
PROM1O43490 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PROM1O43490 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.21□□□□□ -1.58
PROM1O43490 RNU1-19P-201ENST00000363306 165 ntBASIC5.21□□□□□ -1.58
PROM1O43490 RNU4-75P-201ENST00000364621 146 ntBASIC5.21□□□□□ -1.58
PROM1O43490 RNU4-2-201ENST00000365668 141 ntBASIC5.21□□□□□ -1.58
PROM1O43490 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PROM1O43490 RNU6-225P-201ENST00000384613 103 ntBASIC5.21□□□□□ -1.58
PROM1O43490 U3.28-201ENST00000391249 210 ntBASIC5.21□□□□□ -1.58
PROM1O43490 NUDT19P3-201ENST00000404698 555 ntBASIC5.21□□□□□ -1.58
PROM1O43490 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.21□□□□□ -1.58
PROM1O43490 AP000357.1-201ENST00000409926 1165 ntBASIC5.21□□□□□ -1.58
PROM1O43490 RNU6-757P-201ENST00000410334 100 ntBASIC5.21□□□□□ -1.58
PROM1O43490 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.21□□□□□ -1.58
PROM1O43490 AC009302.1-201ENST00000417147 390 ntBASIC5.21□□□□□ -1.58
PROM1O43490 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC5.21□□□□□ -1.58
PROM1O43490 AC019178.2-201ENST00000423595 505 ntBASIC5.21□□□□□ -1.58
PROM1O43490 OR5AW1P-201ENST00000426334 1006 ntBASIC5.21□□□□□ -1.58
PROM1O43490 NANOGP4-201ENST00000427230 913 ntBASIC5.21□□□□□ -1.58
PROM1O43490 NDUFB4P8-201ENST00000435351 367 ntBASIC5.21□□□□□ -1.58
PROM1O43490 AL353706.1-201ENST00000436728 494 ntBASIC5.21□□□□□ -1.58
PROM1O43490 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.21□□□□□ -1.58
PROM1O43490 AC002542.1-201ENST00000440683 193 ntBASIC5.21□□□□□ -1.58
PROM1O43490 AC073465.2-201ENST00000440938 498 ntBASIC5.21□□□□□ -1.58
PROM1O43490 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.21□□□□□ -1.58
PROM1O43490 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.21□□□□□ -1.58
PROM1O43490 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.21□□□□□ -1.58
PROM1O43490 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.21□□□□□ -1.58
PROM1O43490 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.21□□□□□ -1.58
PROM1O43490 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.21□□□□□ -1.58
PROM1O43490 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC5.21□□□□□ -1.58
PROM1O43490 AC104108.1-201ENST00000509930 412 ntBASIC5.21□□□□□ -1.58
PROM1O43490 AF213884.2-201ENST00000510417 903 ntBASIC5.21□□□□□ -1.58
PROM1O43490 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.21□□□□□ -1.58
PROM1O43490 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.21□□□□□ -1.58
PROM1O43490 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.21□□□□□ -1.58
PROM1O43490 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.21□□□□□ -1.58
PROM1O43490 AC025260.1-201ENST00000548858 430 ntBASIC5.21□□□□□ -1.58
PROM1O43490 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.21□□□□□ -1.58
PROM1O43490 AC044913.1-201ENST00000557200 430 ntBASIC5.21□□□□□ -1.58
PROM1O43490 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.21□□□□□ -1.58
PROM1O43490 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.21□□□□□ -1.58
PROM1O43490 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.21□□□□□ -1.58
PROM1O43490 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.21□□□□□ -1.58
PROM1O43490 AC012616.1-201ENST00000600294 197 ntBASIC5.21□□□□□ -1.58
PROM1O43490 AL031985.2-201ENST00000600955 480 ntBASIC5.21□□□□□ -1.58
PROM1O43490 FO393422.1-201ENST00000603908 708 ntBASIC5.21□□□□□ -1.58
PROM1O43490 AL139286.2-201ENST00000606838 396 ntBASIC5.21□□□□□ -1.58
PROM1O43490 AC004492.1-201ENST00000607036 742 ntBASIC5.21□□□□□ -1.58
PROM1O43490 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.21□□□□□ -1.58
PROM1O43490 AC145207.9-201ENST00000623802 325 ntBASIC5.21□□□□□ -1.58
PROM1O43490 AC132068.1-201ENST00000623805 459 ntBASIC5.21□□□□□ -1.58
PROM1O43490 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.21□□□□□ -1.58
PROM1O43490 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PROM1O43490 AC138393.1-206ENST00000540997 1886 ntBASIC5.21□□□□□ -1.58
PROM1O43490 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PROM1O43490 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PROM1O43490 CASC19-206ENST00000641028 1430 ntBASIC5.21□□□□□ -1.58
PROM1O43490 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.21□□□□□ -1.58
PROM1O43490 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PROM1O43490 SOCS5P3-201ENST00000425115 1576 ntBASIC5.21□□□□□ -1.58
PROM1O43490 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PROM1O43490 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PROM1O43490 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PROM1O43490 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms