Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 RPL5P24-201ENST00000463742 885 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PHGDHO43175 AC006511.1-201ENST00000470614 315 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 GAPDHP36-201ENST00000480688 918 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 WBP1LP4-201ENST00000505043 344 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PHGDHO43175 ENPP7P11-201ENST00000505915 627 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 HMGB1P44-201ENST00000508597 572 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.28□□□□□ -1.56
PHGDHO43175 AC109445.1-201ENST00000512356 383 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC5.28□□□□□ -1.56
PHGDHO43175 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.28□□□□□ -1.56
PHGDHO43175 RNU6-1225P-201ENST00000516336 65 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.28□□□□□ -1.56
PHGDHO43175 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.28□□□□□ -1.56
PHGDHO43175 AF279873.1-201ENST00000523393 313 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 MTCO1P47-201ENST00000523889 1271 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 AC005832.3-201ENST00000537929 631 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.28□□□□□ -1.56
PHGDHO43175 AC008015.1-201ENST00000555505 465 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.28□□□□□ -1.56
PHGDHO43175 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.28□□□□□ -1.56
PHGDHO43175 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PHGDHO43175 AL390838.2-201ENST00000602394 274 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 AC123786.2-201ENST00000603459 275 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 Z94722.1-201ENST00000604328 474 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
PHGDHO43175 AC069209.1-201ENST00000619282 651 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.28□□□□□ -1.56
PHGDHO43175 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.28□□□□□ -1.56
PHGDHO43175 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.28□□□□□ -1.56
PHGDHO43175 AC068620.4-201ENST00000636730 1182 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 MIR3974-201ENST00000637126 96 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PHGDHO43175 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PHGDHO43175 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.28□□□□□ -1.56
PHGDHO43175 AL049737.1-201ENST00000413920 1403 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
PHGDHO43175 AC010329.2-201ENST00000595195 2737 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PHGDHO43175 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
PHGDHO43175 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PHGDHO43175 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.28□□□□□ -1.56
PHGDHO43175 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.28□□□□□ -1.56
PHGDHO43175 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PHGDHO43175 MRRFP1-201ENST00000435941 1675 ntBASIC5.28□□□□□ -1.56
PHGDHO43175 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PHGDHO43175 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.27□□□□□ -1.57
PHGDHO43175 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
PHGDHO43175 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.27□□□□□ -1.57
PHGDHO43175 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PHGDHO43175 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
PHGDHO43175 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.27□□□□□ -1.57
PHGDHO43175 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PHGDHO43175 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PHGDHO43175 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PHGDHO43175 MIR133B-201ENST00000362210 119 ntBASIC5.27□□□□□ -1.57
PHGDHO43175 RNA5SP510-201ENST00000364697 99 ntBASIC5.27□□□□□ -1.57
PHGDHO43175 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.27□□□□□ -1.57
PHGDHO43175 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PHGDHO43175 RNA5SP284-201ENST00000384547 118 ntBASIC5.27□□□□□ -1.57
PHGDHO43175 RSL24D1P4-201ENST00000400938 484 ntBASIC5.27□□□□□ -1.57
PHGDHO43175 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
PHGDHO43175 AL133264.1-201ENST00000407157 562 ntBASIC5.27□□□□□ -1.57
PHGDHO43175 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.27□□□□□ -1.57
PHGDHO43175 AC011233.1-201ENST00000422812 283 ntBASIC5.27□□□□□ -1.57
PHGDHO43175 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PHGDHO43175 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.27□□□□□ -1.57
PHGDHO43175 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.27□□□□□ -1.57
PHGDHO43175 AL390119.1-201ENST00000440329 312 ntBASIC5.27□□□□□ -1.57
PHGDHO43175 AC064862.4-201ENST00000442180 334 ntBASIC5.27□□□□□ -1.57
PHGDHO43175 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.27□□□□□ -1.57
PHGDHO43175 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.27□□□□□ -1.57
PHGDHO43175 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.27□□□□□ -1.57
PHGDHO43175 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.27□□□□□ -1.57
PHGDHO43175 AC245028.2-201ENST00000458673 253 ntBASIC5.27□□□□□ -1.57
PHGDHO43175 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.27□□□□□ -1.57
PHGDHO43175 RPS4XP12-201ENST00000461747 709 ntBASIC5.27□□□□□ -1.57
PHGDHO43175 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.27□□□□□ -1.57
PHGDHO43175 RN7SL814P-201ENST00000487715 300 ntBASIC5.27□□□□□ -1.57
PHGDHO43175 RPS24P16-201ENST00000497294 392 ntBASIC5.27□□□□□ -1.57
PHGDHO43175 MYL12BP2-201ENST00000503948 512 ntBASIC5.27□□□□□ -1.57
PHGDHO43175 AC073358.1-201ENST00000505671 684 ntBASIC5.27□□□□□ -1.57
PHGDHO43175 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.27□□□□□ -1.57
PHGDHO43175 RNU6-885P-201ENST00000516607 104 ntBASIC5.27□□□□□ -1.57
PHGDHO43175 AP001207.1-201ENST00000524051 481 ntBASIC5.27□□□□□ -1.57
PHGDHO43175 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.27□□□□□ -1.57
PHGDHO43175 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.27□□□□□ -1.57
PHGDHO43175 ELOCP32-201ENST00000548625 324 ntBASIC5.27□□□□□ -1.57
PHGDHO43175 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.27□□□□□ -1.57
PHGDHO43175 AC040958.1-201ENST00000561102 201 ntBASIC5.27□□□□□ -1.57
PHGDHO43175 AC005341.1-201ENST00000571086 708 ntBASIC5.27□□□□□ -1.57
PHGDHO43175 MIR4505-201ENST00000582238 73 ntBASIC5.27□□□□□ -1.57
PHGDHO43175 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.27□□□□□ -1.57
PHGDHO43175 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.27□□□□□ -1.57
PHGDHO43175 Z99497.2-201ENST00000603634 310 ntBASIC5.27□□□□□ -1.57
PHGDHO43175 AC009220.3-201ENST00000604318 586 ntBASIC5.27□□□□□ -1.57
PHGDHO43175 AC011626.1-201ENST00000604710 562 ntBASIC5.27□□□□□ -1.57
PHGDHO43175 AC010200.2-201ENST00000605098 235 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms