Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SOX1O00570 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SOX1O00570 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.49□□□□□ -1.37
SOX1O00570 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
SOX1O00570 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC6.49□□□□□ -1.37
SOX1O00570 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
SOX1O00570 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
SOX1O00570 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.49□□□□□ -1.37
SOX1O00570 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC6.49□□□□□ -1.37
SOX1O00570 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
SOX1O00570 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
SOX1O00570 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.49□□□□□ -1.37
SOX1O00570 SUGT1P1-201ENST00000379514 476 ntBASIC6.49□□□□□ -1.37
SOX1O00570 RNU1-106P-201ENST00000384382 164 ntBASIC6.49□□□□□ -1.37
SOX1O00570 AL590004.1-201ENST00000405321 300 ntBASIC6.49□□□□□ -1.37
SOX1O00570 MIR1302-11-201ENST00000408051 138 ntBASIC6.49□□□□□ -1.37
SOX1O00570 MIR1302-9-201ENST00000408365 138 ntBASIC6.49□□□□□ -1.37
SOX1O00570 MIR1302-10-201ENST00000408734 138 ntBASIC6.49□□□□□ -1.37
SOX1O00570 RPS3AP3-201ENST00000411933 242 ntBASIC6.49□□□□□ -1.37
SOX1O00570 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SOX1O00570 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC6.49□□□□□ -1.37
SOX1O00570 AL513185.2-201ENST00000425543 193 ntBASIC6.49□□□□□ -1.37
SOX1O00570 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SOX1O00570 KCTD9P3-201ENST00000434597 1169 ntBASIC6.49□□□□□ -1.37
SOX1O00570 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SOX1O00570 RPS17P15-201ENST00000475609 349 ntBASIC6.49□□□□□ -1.37
SOX1O00570 RPS29P25-201ENST00000481709 171 ntBASIC6.49□□□□□ -1.37
SOX1O00570 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.49□□□□□ -1.37
SOX1O00570 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC6.49□□□□□ -1.37
SOX1O00570 HMGB1P28-201ENST00000507778 552 ntBASIC6.49□□□□□ -1.37
SOX1O00570 AC105914.1-201ENST00000511798 226 ntBASIC6.49□□□□□ -1.37
SOX1O00570 AC026412.2-201ENST00000512270 1075 ntBASIC6.49□□□□□ -1.37
SOX1O00570 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC6.49□□□□□ -1.37
SOX1O00570 RNA5SP216-201ENST00000516111 123 ntBASIC6.49□□□□□ -1.37
SOX1O00570 Y_RNA.675-201ENST00000516389 149 ntBASIC6.49□□□□□ -1.37
SOX1O00570 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC6.49□□□□□ -1.37
SOX1O00570 ARL2BPP5-201ENST00000523141 481 ntBASIC6.49□□□□□ -1.37
SOX1O00570 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC6.49□□□□□ -1.37
SOX1O00570 CASC19-203ENST00000523510 575 ntTSL 3 BASIC6.49□□□□□ -1.37
SOX1O00570 AP001922.4-201ENST00000526967 290 ntBASIC6.49□□□□□ -1.37
SOX1O00570 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC6.49□□□□□ -1.37
SOX1O00570 AC138915.2-201ENST00000569776 97 ntBASIC6.49□□□□□ -1.37
SOX1O00570 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.49□□□□□ -1.37
SOX1O00570 MIR5697-201ENST00000578045 78 ntBASIC6.49□□□□□ -1.37
SOX1O00570 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC6.49□□□□□ -1.37
SOX1O00570 AC010487.1-201ENST00000594408 1172 ntBASIC6.49□□□□□ -1.37
SOX1O00570 MIR1302-2-201ENST00000607096 138 ntBASIC6.49□□□□□ -1.37
SOX1O00570 AC135507.2-201ENST00000612443 309 ntBASIC6.49□□□□□ -1.37
SOX1O00570 AC234782.5-201ENST00000617723 324 ntBASIC6.49□□□□□ -1.37
SOX1O00570 AC019278.1-201ENST00000623516 479 ntBASIC6.49□□□□□ -1.37
SOX1O00570 AC068880.5-201ENST00000624331 290 ntBASIC6.49□□□□□ -1.37
SOX1O00570 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
SOX1O00570 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.49□□□□□ -1.37
SOX1O00570 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SOX1O00570 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.49□□□□□ -1.37
SOX1O00570 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
SOX1O00570 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SOX1O00570 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SOX1O00570 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SOX1O00570 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.49□□□□□ -1.37
SOX1O00570 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
SOX1O00570 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SOX1O00570 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SOX1O00570 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.48□□□□□ -1.37
SOX1O00570 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SOX1O00570 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC6.48□□□□□ -1.37
SOX1O00570 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SOX1O00570 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SOX1O00570 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SOX1O00570 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SOX1O00570 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
SOX1O00570 AC012618.3-205ENST00000637896 1496 ntBASIC6.48□□□□□ -1.37
SOX1O00570 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SOX1O00570 ZNF37BP-203ENST00000452306 1352 ntBASIC6.48□□□□□ -1.37
SOX1O00570 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
SOX1O00570 AC009237.3-203ENST00000442128 3551 ntBASIC6.48□□□□□ -1.37
SOX1O00570 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
SOX1O00570 RNA5SP183-201ENST00000362452 119 ntBASIC6.48□□□□□ -1.37
SOX1O00570 RNA5SP234-201ENST00000363916 119 ntBASIC6.48□□□□□ -1.37
SOX1O00570 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SOX1O00570 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC6.48□□□□□ -1.37
SOX1O00570 RNU6-532P-201ENST00000384318 107 ntBASIC6.48□□□□□ -1.37
SOX1O00570 HMGA1P8-201ENST00000414130 321 ntBASIC6.48□□□□□ -1.37
SOX1O00570 MRPL53P1-201ENST00000414323 319 ntBASIC6.48□□□□□ -1.37
SOX1O00570 C4BPAP2-201ENST00000428434 478 ntBASIC6.48□□□□□ -1.37
SOX1O00570 BMS1P19-201ENST00000433925 393 ntBASIC6.48□□□□□ -1.37
SOX1O00570 RAD23BP3-201ENST00000454157 1152 ntBASIC6.48□□□□□ -1.37
SOX1O00570 AC091564.1-201ENST00000464563 479 ntBASIC6.48□□□□□ -1.37
SOX1O00570 AC007537.2-201ENST00000472093 511 ntBASIC6.48□□□□□ -1.37
SOX1O00570 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.48□□□□□ -1.37
SOX1O00570 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.48□□□□□ -1.37
SOX1O00570 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.48□□□□□ -1.37
SOX1O00570 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SOX1O00570 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.48□□□□□ -1.37
SOX1O00570 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC6.48□□□□□ -1.37
SOX1O00570 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC6.48□□□□□ -1.37
SOX1O00570 MIR548Y-201ENST00000582739 110 ntBASIC6.48□□□□□ -1.37
SOX1O00570 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.48□□□□□ -1.37
SOX1O00570 PRELID3BP8-201ENST00000604148 295 ntBASIC6.48□□□□□ -1.37
SOX1O00570 AC115286.1-201ENST00000604298 434 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms