Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 DPPA2P1-201ENST00000428060 556 ntBASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 AC007563.3-201ENST00000433233 371 ntBASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 PHBP16-201ENST00000446318 950 ntBASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 RPL7P59-201ENST00000447700 943 ntBASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 RN7SL393P-201ENST00000463588 296 ntBASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 TFP1-203ENST00000490470 561 ntTSL 4 BASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 AC114967.1-201ENST00000504890 259 ntBASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 HAUS1P1-201ENST00000505275 832 ntBASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 AC122718.2-201ENST00000505325 591 ntBASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 MTND4LP22-201ENST00000508209 276 ntBASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 AC027369.2-201ENST00000528030 440 ntBASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 AC007956.1-201ENST00000555623 542 ntBASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 AP001496.3-201ENST00000580230 913 ntBASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 AC015802.2-201ENST00000589690 189 ntBASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 AC067852.4-201ENST00000590314 478 ntBASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 LINC00854-204ENST00000594691 649 ntAPPRIS P5 TSL 5 BASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 AC005156.1-201ENST00000613371 573 ntBASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 CR381572.2-201ENST00000624852 397 ntBASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 AC132825.1-201ENST00000463573 2247 ntBASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC2.11□□□□□ -2.07
LINC01558Q9Y6Z2 AC091885.2-201ENST00000510391 1791 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 MIR130B-202ENST00000385018 82 ntBASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 RNA5SP105-201ENST00000391123 113 ntBASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 AP000567.1-201ENST00000406413 156 ntBASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 MIR1179-201ENST00000408703 91 ntBASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 PGBD4P8-201ENST00000412993 562 ntBASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 AC010740.1-201ENST00000417035 684 ntBASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 VN1R31P-201ENST00000417498 730 ntBASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 AC245291.1-201ENST00000419501 328 ntBASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 VN1R20P-201ENST00000425215 966 ntBASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 AL132765.1-201ENST00000434165 553 ntBASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 Z84478.1-201ENST00000438230 1219 ntBASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 UBE2V1P3-201ENST00000439651 417 ntBASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 RPS27P5-201ENST00000444247 244 ntBASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 KNOP1P3-201ENST00000446933 426 ntBASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 AC098824.1-201ENST00000453565 980 ntBASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 HNRNPDLP3-201ENST00000456745 380 ntBASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 AC018638.3-201ENST00000461273 132 ntBASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 OR52A4P-201ENST00000472867 958 ntBASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 RPL7AP56-201ENST00000476420 791 ntBASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 RN7SL222P-201ENST00000476452 299 ntBASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 ACTG1P13-201ENST00000486987 1043 ntBASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 RN7SL271P-201ENST00000487601 295 ntBASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 RN7SL283P-201ENST00000489055 303 ntBASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 KCTD9P5-201ENST00000504141 1170 ntBASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 NREP-217ENST00000509025 987 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 AC106806.2-201ENST00000509365 500 ntBASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 NREP-223ENST00000515855 801 ntTSL 4 BASIC2.1□□□□□ -2.07
LINC01558Q9Y6Z2 RNA5SP385-201ENST00000515947 110 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms