Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 AP002799.1-201ENST00000623552 423 ntBASIC5.01□□□□□ -1.61
PKP3Q9Y446 AC068057.2-201ENST00000624047 895 ntBASIC5.01□□□□□ -1.61
PKP3Q9Y446 U6.107-201ENST00000637108 79 ntBASIC5.01□□□□□ -1.61
PKP3Q9Y446 BX649567.1-201ENST00000642071 1134 ntBASIC5.01□□□□□ -1.61
PKP3Q9Y446 AL731532.2-201ENST00000623542 1953 ntBASIC5.01□□□□□ -1.61
PKP3Q9Y446 HSPA8P14-201ENST00000552265 1805 ntBASIC5.01□□□□□ -1.61
PKP3Q9Y446 MRRFP1-201ENST00000435941 1675 ntBASIC5.01□□□□□ -1.61
PKP3Q9Y446 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PKP3Q9Y446 AC093849.1-201ENST00000563631 2209 ntBASIC5.01□□□□□ -1.61
PKP3Q9Y446 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
PKP3Q9Y446 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.01□□□□□ -1.61
PKP3Q9Y446 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.01□□□□□ -1.61
PKP3Q9Y446 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PKP3Q9Y446 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.01□□□□□ -1.61
PKP3Q9Y446 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PKP3Q9Y446 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PKP3Q9Y446 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PKP3Q9Y446 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PKP3Q9Y446 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
PKP3Q9Y446 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5□□□□□ -1.61
PKP3Q9Y446 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5□□□□□ -1.61
PKP3Q9Y446 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5□□□□□ -1.61
PKP3Q9Y446 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5□□□□□ -1.61
PKP3Q9Y446 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5□□□□□ -1.61
PKP3Q9Y446 RBPJP2-201ENST00000618187 1444 ntBASIC5□□□□□ -1.61
PKP3Q9Y446 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5□□□□□ -1.61
PKP3Q9Y446 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5□□□□□ -1.61
PKP3Q9Y446 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
PKP3Q9Y446 SNORA73.1-201ENST00000363107 205 ntBASIC5□□□□□ -1.61
PKP3Q9Y446 RNU4-28P-201ENST00000364739 141 ntBASIC5□□□□□ -1.61
PKP3Q9Y446 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
PKP3Q9Y446 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PKP3Q9Y446 RNU6-98P-201ENST00000384173 107 ntBASIC5□□□□□ -1.61
PKP3Q9Y446 RN7SKP16-201ENST00000410180 299 ntBASIC5□□□□□ -1.61
PKP3Q9Y446 GJA6P-201ENST00000415117 1042 ntBASIC5□□□□□ -1.61
PKP3Q9Y446 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC5□□□□□ -1.61
PKP3Q9Y446 AC104333.2-201ENST00000422630 192 ntBASIC5□□□□□ -1.61
PKP3Q9Y446 AL450023.3-201ENST00000440592 271 ntBASIC5□□□□□ -1.61
PKP3Q9Y446 EEF1A1P39-201ENST00000440791 250 ntBASIC5□□□□□ -1.61
PKP3Q9Y446 RPL34P20-201ENST00000442771 351 ntBASIC5□□□□□ -1.61
PKP3Q9Y446 MTCYBP42-201ENST00000444653 1130 ntBASIC5□□□□□ -1.61
PKP3Q9Y446 CASP3P1-201ENST00000446037 609 ntBASIC5□□□□□ -1.61
PKP3Q9Y446 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5□□□□□ -1.61
PKP3Q9Y446 AL691482.1-201ENST00000453255 87 ntBASIC5□□□□□ -1.61
PKP3Q9Y446 RPS6P2-201ENST00000454208 705 ntBASIC5□□□□□ -1.61
PKP3Q9Y446 AL133244.1-201ENST00000456007 258 ntBASIC5□□□□□ -1.61
PKP3Q9Y446 RPL23AP37-201ENST00000479658 549 ntBASIC5□□□□□ -1.61
PKP3Q9Y446 RN7SL319P-201ENST00000480656 221 ntBASIC5□□□□□ -1.61
PKP3Q9Y446 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
PKP3Q9Y446 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5□□□□□ -1.61
PKP3Q9Y446 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5□□□□□ -1.61
PKP3Q9Y446 AC008565.1-201ENST00000509046 885 ntBASIC5□□□□□ -1.61
PKP3Q9Y446 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5□□□□□ -1.61
PKP3Q9Y446 IGKV2D-10-201ENST00000520194 281 ntBASIC5□□□□□ -1.61
PKP3Q9Y446 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5□□□□□ -1.61
PKP3Q9Y446 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5□□□□□ -1.61
PKP3Q9Y446 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5□□□□□ -1.61
PKP3Q9Y446 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5□□□□□ -1.61
PKP3Q9Y446 MIR4691-201ENST00000583764 85 ntBASIC5□□□□□ -1.61
PKP3Q9Y446 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5□□□□□ -1.61
PKP3Q9Y446 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5□□□□□ -1.61
PKP3Q9Y446 AC021755.4-201ENST00000616620 456 ntBASIC5□□□□□ -1.61
PKP3Q9Y446 AC019206.1-201ENST00000621938 425 ntBASIC5□□□□□ -1.61
PKP3Q9Y446 AP002791.1-201ENST00000623291 381 ntBASIC5□□□□□ -1.61
PKP3Q9Y446 AC019226.2-201ENST00000625973 424 ntBASIC5□□□□□ -1.61
PKP3Q9Y446 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5□□□□□ -1.61
PKP3Q9Y446 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
PKP3Q9Y446 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PKP3Q9Y446 AC111188.2-201ENST00000529697 1387 ntBASIC5□□□□□ -1.61
PKP3Q9Y446 AL137100.1-201ENST00000556703 1620 ntBASIC5□□□□□ -1.61
PKP3Q9Y446 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
PKP3Q9Y446 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PKP3Q9Y446 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PKP3Q9Y446 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
PKP3Q9Y446 AL603750.1-201ENST00000624216 1717 ntBASIC5□□□□□ -1.61
PKP3Q9Y446 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
PKP3Q9Y446 AC100871.1-201ENST00000507871 1456 ntBASIC5□□□□□ -1.61
PKP3Q9Y446 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5□□□□□ -1.61
PKP3Q9Y446 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5□□□□□ -1.61
PKP3Q9Y446 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.99□□□□□ -1.61
PKP3Q9Y446 ECM1P2-201ENST00000503354 1577 ntBASIC4.99□□□□□ -1.61
PKP3Q9Y446 AC011447.7-201ENST00000624228 1590 ntBASIC4.99□□□□□ -1.61
PKP3Q9Y446 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
PKP3Q9Y446 AC109780.1-201ENST00000451768 1344 ntBASIC4.99□□□□□ -1.61
PKP3Q9Y446 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.99□□□□□ -1.61
PKP3Q9Y446 AC025574.1-201ENST00000554784 1653 ntBASIC4.99□□□□□ -1.61
PKP3Q9Y446 AC097461.1-201ENST00000568928 2821 ntBASIC4.99□□□□□ -1.61
PKP3Q9Y446 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PKP3Q9Y446 SAMMSON-213ENST00000641336 1521 ntBASIC4.99□□□□□ -1.61
PKP3Q9Y446 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PKP3Q9Y446 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.99□□□□□ -1.61
PKP3Q9Y446 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PKP3Q9Y446 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.99□□□□□ -1.61
PKP3Q9Y446 RNU4-4P-201ENST00000364588 130 ntBASIC4.99□□□□□ -1.61
PKP3Q9Y446 Y_RNA.472-201ENST00000384322 102 ntBASIC4.99□□□□□ -1.61
PKP3Q9Y446 AL078599.1-201ENST00000402075 293 ntBASIC4.99□□□□□ -1.61
PKP3Q9Y446 AL136310.1-201ENST00000404926 654 ntBASIC4.99□□□□□ -1.61
PKP3Q9Y446 AC092745.2-202ENST00000411880 369 ntBASIC4.99□□□□□ -1.61
PKP3Q9Y446 RPL23AP27-201ENST00000415161 451 ntBASIC4.99□□□□□ -1.61
PKP3Q9Y446 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms