Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 OR11J2P-201ENST00000555298 907 ntBASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 AL161713.1-201ENST00000555538 145 ntBASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 AC105129.1-201ENST00000560250 297 ntBASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 AC106785.3-201ENST00000564064 847 ntBASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 AC010680.3-201ENST00000604215 520 ntBASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 AP000864.1-201ENST00000609424 650 ntBASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 ZNRD1ASP-221ENST00000637794 1074 ntBASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 AL353743.4-201ENST00000422653 1547 ntBASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.69□□□□□ -1.82
RCL1Q9Y2P8 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 AC006042.3-201ENST00000454684 1469 ntBASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 AC018529.3-201ENST00000624212 2254 ntBASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 USP9YP4-201ENST00000424401 1745 ntBASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 ZNF962P-201ENST00000443465 3140 ntBASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 MIR708-201ENST00000390708 88 ntBASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 AP002530.1-201ENST00000405705 684 ntBASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 U3.36-201ENST00000408418 213 ntBASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 RNA5SP39-201ENST00000411245 120 ntBASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 FAR2P1-206ENST00000449736 709 ntBASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 ISCUP1-201ENST00000454451 448 ntBASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 PRELID3BP7-201ENST00000503606 469 ntBASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 AC024558.1-201ENST00000505008 528 ntBASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 AC108157.1-201ENST00000510511 539 ntBASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 ATP5LP3-201ENST00000514223 304 ntBASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 RGS5-219ENST00000528019 512 ntTSL 4 BASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 AP001521.2-201ENST00000608772 546 ntBASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 AC004948.1-201ENST00000609858 672 ntBASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 AL035461.2-201ENST00000619201 524 ntBASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 AC139769.1-204ENST00000472297 1931 ntBASIC3.68□□□□□ -1.82
RCL1Q9Y2P8 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
RCL1Q9Y2P8 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
RCL1Q9Y2P8 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
RCL1Q9Y2P8 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RCL1Q9Y2P8 MAPK10-253ENST00000641010 4072 ntBASIC3.67□□□□□ -1.82
RCL1Q9Y2P8 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RCL1Q9Y2P8 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RCL1Q9Y2P8 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
RCL1Q9Y2P8 IGKV7-3-201ENST00000357453 298 ntBASIC3.67□□□□□ -1.82
RCL1Q9Y2P8 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.67□□□□□ -1.82
RCL1Q9Y2P8 RNU6-452P-201ENST00000384406 107 ntBASIC3.67□□□□□ -1.82
RCL1Q9Y2P8 AL391361.1-201ENST00000405580 489 ntBASIC3.67□□□□□ -1.82
RCL1Q9Y2P8 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.67□□□□□ -1.82
RCL1Q9Y2P8 AP000534.2-201ENST00000412729 568 ntBASIC3.67□□□□□ -1.82
RCL1Q9Y2P8 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.67□□□□□ -1.82
RCL1Q9Y2P8 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC3.67□□□□□ -1.82
RCL1Q9Y2P8 ELOCP18-201ENST00000434209 337 ntBASIC3.67□□□□□ -1.82
RCL1Q9Y2P8 MRPS33P4-201ENST00000434892 317 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms