Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 CR382285.1-202ENST00000604687 547 ntBASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 HMGB1P50-201ENST00000605814 607 ntBASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 AL136985.2-201ENST00000607372 535 ntBASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 RN7SL820P-201ENST00000616437 299 ntBASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 AL357556.1-201ENST00000421884 1388 ntBASIC7.46□□□□□ -1.22
VPS9D1Q9Y2B5 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 Y_RNA.19-201ENST00000362462 99 ntBASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 RNU6-1117P-201ENST00000384525 104 ntBASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 DHFRP6-201ENST00000401776 268 ntBASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 RNU6-735P-201ENST00000410612 107 ntBASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 RN7SKP89-201ENST00000410774 242 ntBASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 SNX18P3-201ENST00000424993 835 ntBASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 AC130472.1-201ENST00000427885 309 ntBASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 AF274573.1-201ENST00000430535 494 ntBASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 KRTAP3-4P-201ENST00000430780 280 ntBASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 MYL8P-204ENST00000431574 518 ntBASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 AC093156.1-201ENST00000440382 670 ntBASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 AC127024.1-201ENST00000490847 418 ntBASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 AC090453.1-201ENST00000495560 436 ntBASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 IGKV1-39-201ENST00000498574 398 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 ANKRD55-205ENST00000513241 626 ntTSL 5 BASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 RNU4-71P-201ENST00000516258 113 ntBASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 IGLV10-67-201ENST00000519446 325 ntBASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 AP000907.2-201ENST00000530827 353 ntBASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 MIR5583-1-201ENST00000580941 59 ntBASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 MAGOH2P-202ENST00000584384 429 ntBASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 AC007136.1-201ENST00000589141 199 ntBASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 AL138825.1-201ENST00000618587 192 ntBASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 AC016582.3-206ENST00000636547 207 ntBASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 AC018688.1-201ENST00000636528 1754 ntBASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
VPS9D1Q9Y2B5 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 RNU12-2P-201ENST00000364789 156 ntBASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 RNU6-532P-201ENST00000384318 107 ntBASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 RNA5SP18-201ENST00000390935 121 ntBASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 MIR450B-201ENST00000401182 78 ntBASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 SNORA2C-201ENST00000408564 137 ntBASIC7.44□□□□□ -1.22
VPS9D1Q9Y2B5 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms