Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 SAGE3P-201ENST00000619800 1635 ntBASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 GAPDHP24-201ENST00000328713 983 ntBASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 SYF2-202ENST00000354361 926 ntTSL 2 BASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 Y_RNA.58-201ENST00000362807 102 ntBASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 Y_RNA.154-201ENST00000363624 102 ntBASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 U3.7-201ENST00000363668 216 ntBASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 RNY3P1-201ENST00000365085 102 ntBASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 RNY3-201ENST00000365484 102 ntBASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 Y_RNA.394-201ENST00000383942 103 ntBASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 Y_RNA.490-201ENST00000384413 102 ntBASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 SNORA70-201ENST00000384436 135 ntBASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 MIR199B-201ENST00000384849 110 ntBASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 Y_RNA.625-201ENST00000411256 107 ntBASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 JKAMPP1-201ENST00000413804 919 ntBASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 AC013429.2-201ENST00000418798 781 ntBASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 NPM1P34-201ENST00000428821 893 ntBASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 SUMO2P3-201ENST00000438311 288 ntBASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 H2AFZP6-201ENST00000444403 394 ntBASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 RBMY2TP-201ENST00000451162 947 ntBASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 RPL18AP17-201ENST00000455326 198 ntBASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 RPL7AP52-201ENST00000458096 790 ntBASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 AC087312.1-201ENST00000471411 480 ntBASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 AC007182.2-201ENST00000489251 402 ntBASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 AC073610.1-201ENST00000489971 396 ntBASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 NPM1P27-201ENST00000502784 830 ntBASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 NAF1-205ENST00000509434 385 ntTSL 3 BASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 AC078814.3-201ENST00000553036 491 ntBASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 POLR2KP1-201ENST00000553226 168 ntBASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 AP005119.1-201ENST00000580956 292 ntBASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 AC011712.1-201ENST00000588959 234 ntBASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 KC877982.1-201ENST00000602313 470 ntBASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 AC013553.2-201ENST00000604244 589 ntBASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 RFPL4AP6-201ENST00000616792 846 ntBASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 AC034229.6-201ENST00000623704 224 ntBASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 AC116563.2-201ENST00000624751 535 ntBASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 PFKM-232ENST00000629846 381 ntTSL 4 BASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 PABPC1P8-201ENST00000452851 2086 ntBASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
ZC3H4Q9UPT8 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.66□□□□□ -1.18
ZC3H4Q9UPT8 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
ZC3H4Q9UPT8 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC7.66□□□□□ -1.18
ZC3H4Q9UPT8 AC010928.1-201ENST00000592477 1447 ntBASIC7.66□□□□□ -1.18
ZC3H4Q9UPT8 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
ZC3H4Q9UPT8 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
ZC3H4Q9UPT8 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.66□□□□□ -1.18
ZC3H4Q9UPT8 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
ZC3H4Q9UPT8 OR4A15-201ENST00000314706 1035 ntBASIC7.66□□□□□ -1.18
ZC3H4Q9UPT8 MIR375-201ENST00000362103 64 ntBASIC7.66□□□□□ -1.18
ZC3H4Q9UPT8 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC7.66□□□□□ -1.18
ZC3H4Q9UPT8 Y_RNA.419-201ENST00000384041 102 ntBASIC7.66□□□□□ -1.18
ZC3H4Q9UPT8 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7.66□□□□□ -1.18
ZC3H4Q9UPT8 AL359704.1-201ENST00000411586 781 ntBASIC7.66□□□□□ -1.18
ZC3H4Q9UPT8 DPPA2P3-201ENST00000411853 655 ntBASIC7.66□□□□□ -1.18
ZC3H4Q9UPT8 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC7.66□□□□□ -1.18
ZC3H4Q9UPT8 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC7.66□□□□□ -1.18
ZC3H4Q9UPT8 AC004690.1-201ENST00000418216 328 ntBASIC7.66□□□□□ -1.18
ZC3H4Q9UPT8 ISCA1P6-201ENST00000427740 390 ntBASIC7.66□□□□□ -1.18
ZC3H4Q9UPT8 AC073335.1-201ENST00000427776 363 ntBASIC7.66□□□□□ -1.18
ZC3H4Q9UPT8 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC7.66□□□□□ -1.18
ZC3H4Q9UPT8 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC7.66□□□□□ -1.18
ZC3H4Q9UPT8 UBE2V1P5-201ENST00000440070 405 ntBASIC7.66□□□□□ -1.18
ZC3H4Q9UPT8 MTND6P13-201ENST00000443510 523 ntBASIC7.66□□□□□ -1.18
ZC3H4Q9UPT8 AC099563.1-201ENST00000456086 418 ntBASIC7.66□□□□□ -1.18
ZC3H4Q9UPT8 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC7.66□□□□□ -1.18
ZC3H4Q9UPT8 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC7.66□□□□□ -1.18
ZC3H4Q9UPT8 COPS8P2-201ENST00000473228 627 ntBASIC7.66□□□□□ -1.18
ZC3H4Q9UPT8 KCTD9P5-201ENST00000504141 1170 ntBASIC7.66□□□□□ -1.18
ZC3H4Q9UPT8 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC7.66□□□□□ -1.18
ZC3H4Q9UPT8 CYCSP22-201ENST00000517555 339 ntBASIC7.66□□□□□ -1.18
ZC3H4Q9UPT8 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC7.66□□□□□ -1.18
ZC3H4Q9UPT8 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
ZC3H4Q9UPT8 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms