Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC6.58□□□□□ -1.36
ZNRF3Q9ULT6 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC6.58□□□□□ -1.36
ZNRF3Q9ULT6 AC005341.1-201ENST00000571086 708 ntBASIC6.58□□□□□ -1.36
ZNRF3Q9ULT6 MIR4801-201ENST00000582704 82 ntBASIC6.58□□□□□ -1.36
ZNRF3Q9ULT6 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC6.58□□□□□ -1.36
ZNRF3Q9ULT6 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.58□□□□□ -1.36
ZNRF3Q9ULT6 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.58□□□□□ -1.36
ZNRF3Q9ULT6 AC087283.1-201ENST00000604029 1074 ntBASIC6.58□□□□□ -1.36
ZNRF3Q9ULT6 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.58□□□□□ -1.36
ZNRF3Q9ULT6 AC063952.1-203ENST00000634410 658 ntBASIC6.58□□□□□ -1.36
ZNRF3Q9ULT6 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.58□□□□□ -1.36
ZNRF3Q9ULT6 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ZNRF3Q9ULT6 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ZNRF3Q9ULT6 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ZNRF3Q9ULT6 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ZNRF3Q9ULT6 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ZNRF3Q9ULT6 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ZNRF3Q9ULT6 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ZNRF3Q9ULT6 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC6.58□□□□□ -1.36
ZNRF3Q9ULT6 OR52B5P-204ENST00000641744 3467 ntBASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 DCAF13P3-201ENST00000561147 1334 ntBASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 Y_RNA.18-201ENST00000362461 102 ntBASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 RNU6-517P-201ENST00000384362 110 ntBASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 RNU6-1215P-201ENST00000384441 102 ntBASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 RNU2-16P-201ENST00000410712 136 ntBASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 AC022028.1-201ENST00000412054 408 ntBASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 UBE2V1P10-201ENST00000414685 269 ntBASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 RAD23BP2-201ENST00000416003 1207 ntBASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 RPL7P44-201ENST00000424827 742 ntBASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 CENPIP1-201ENST00000425713 902 ntBASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 USP9YP9-201ENST00000429406 715 ntBASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 COX6CP2-201ENST00000444980 225 ntBASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 DDX39BP2-208ENST00000453923 258 ntBASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 Z92846.1-201ENST00000456203 268 ntBASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 ANK3-207ENST00000460468 677 ntTSL 3 BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 AC072039.1-201ENST00000477611 581 ntBASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 RN7SL591P-201ENST00000496150 292 ntBASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 AC104685.1-201ENST00000502445 371 ntBASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 ATP1B1P1-201ENST00000509767 915 ntBASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 RNU6-1225P-201ENST00000516336 65 ntBASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 AC018558.5-201ENST00000565840 952 ntBASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 AC074051.3-201ENST00000570238 358 ntBASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 BPTFP1-201ENST00000579209 492 ntBASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 AC079089.3-201ENST00000603094 673 ntBASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 AC006270.3-201ENST00000605967 1036 ntBASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 AL022394.1-201ENST00000606979 292 ntBASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 WT1-AS_8.1-201ENST00000615200 275 ntBASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 AC116165.2-201ENST00000616705 206 ntBASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 AC241377.1-201ENST00000619797 406 ntBASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 PCMTD1P7-201ENST00000634506 357 ntBASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ZNRF3Q9ULT6 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ZNRF3Q9ULT6 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
ZNRF3Q9ULT6 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ZNRF3Q9ULT6 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.56□□□□□ -1.36
ZNRF3Q9ULT6 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
ZNRF3Q9ULT6 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
ZNRF3Q9ULT6 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ZNRF3Q9ULT6 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
ZNRF3Q9ULT6 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ZNRF3Q9ULT6 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
ZNRF3Q9ULT6 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
ZNRF3Q9ULT6 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 155.9 ms