Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 FP236240.3-201ENST00000623061 327 ntBASIC5.27□□□□□ -1.57
SCN11AQ9UI33 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.27□□□□□ -1.57
SCN11AQ9UI33 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.26□□□□□ -1.57
SCN11AQ9UI33 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
SCN11AQ9UI33 AC073335.1-201ENST00000427776 363 ntBASIC5.26□□□□□ -1.57
SCN11AQ9UI33 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.26□□□□□ -1.57
SCN11AQ9UI33 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC5.26□□□□□ -1.57
SCN11AQ9UI33 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC5.26□□□□□ -1.57
SCN11AQ9UI33 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SCN11AQ9UI33 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SCN11AQ9UI33 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.26□□□□□ -1.57
SCN11AQ9UI33 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.26□□□□□ -1.57
SCN11AQ9UI33 AL451086.1-201ENST00000605596 223 ntBASIC5.26□□□□□ -1.57
SCN11AQ9UI33 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SCN11AQ9UI33 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SCN11AQ9UI33 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.25□□□□□ -1.57
SCN11AQ9UI33 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.25□□□□□ -1.57
SCN11AQ9UI33 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.25□□□□□ -1.57
SCN11AQ9UI33 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
SCN11AQ9UI33 RPS3AP6-201ENST00000484430 795 ntBASIC5.25□□□□□ -1.57
SCN11AQ9UI33 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.25□□□□□ -1.57
SCN11AQ9UI33 AL031666.3-201ENST00000609320 1006 ntBASIC5.25□□□□□ -1.57
SCN11AQ9UI33 AC023509.5-201ENST00000617434 807 ntBASIC5.25□□□□□ -1.57
SCN11AQ9UI33 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.25□□□□□ -1.57
SCN11AQ9UI33 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.25□□□□□ -1.57
SCN11AQ9UI33 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SCN11AQ9UI33 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.25□□□□□ -1.57
SCN11AQ9UI33 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SCN11AQ9UI33 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SCN11AQ9UI33 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC5.25□□□□□ -1.57
SCN11AQ9UI33 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SCN11AQ9UI33 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.25□□□□□ -1.57
SCN11AQ9UI33 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SCN11AQ9UI33 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SCN11AQ9UI33 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SCN11AQ9UI33 SNORA60-201ENST00000362396 134 ntBASIC5.24□□□□□ -1.57
SCN11AQ9UI33 RN7SKP159-201ENST00000410657 292 ntBASIC5.24□□□□□ -1.57
SCN11AQ9UI33 CRYBB2P1-203ENST00000415709 538 ntBASIC5.24□□□□□ -1.57
SCN11AQ9UI33 OR4F13P-201ENST00000428478 931 ntBASIC5.24□□□□□ -1.57
SCN11AQ9UI33 CYCSP43-201ENST00000438233 310 ntBASIC5.24□□□□□ -1.57
SCN11AQ9UI33 AC104306.1-201ENST00000449702 371 ntBASIC5.24□□□□□ -1.57
SCN11AQ9UI33 RPL21P7-201ENST00000557463 483 ntBASIC5.24□□□□□ -1.57
SCN11AQ9UI33 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.24□□□□□ -1.57
SCN11AQ9UI33 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.24□□□□□ -1.57
SCN11AQ9UI33 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.24□□□□□ -1.57
SCN11AQ9UI33 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.24□□□□□ -1.57
SCN11AQ9UI33 MIR6868-201ENST00000611215 58 ntBASIC5.24□□□□□ -1.57
SCN11AQ9UI33 AC138965.3-201ENST00000623875 498 ntBASIC5.24□□□□□ -1.57
SCN11AQ9UI33 AP005264.7-201ENST00000625003 745 ntBASIC5.24□□□□□ -1.57
SCN11AQ9UI33 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SCN11AQ9UI33 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SCN11AQ9UI33 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.24□□□□□ -1.57
SCN11AQ9UI33 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SCN11AQ9UI33 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SCN11AQ9UI33 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
SCN11AQ9UI33 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
SCN11AQ9UI33 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SCN11AQ9UI33 SNORA5A-201ENST00000384111 134 ntBASIC5.24□□□□□ -1.57
SCN11AQ9UI33 AL035246.1-201ENST00000433554 1255 ntBASIC5.24□□□□□ -1.57
SCN11AQ9UI33 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SCN11AQ9UI33 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SCN11AQ9UI33 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.24□□□□□ -1.57
SCN11AQ9UI33 RPL7P15-201ENST00000461190 712 ntBASIC5.24□□□□□ -1.57
SCN11AQ9UI33 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.24□□□□□ -1.57
SCN11AQ9UI33 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.24□□□□□ -1.57
SCN11AQ9UI33 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.24□□□□□ -1.57
SCN11AQ9UI33 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.24□□□□□ -1.57
SCN11AQ9UI33 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.24□□□□□ -1.57
SCN11AQ9UI33 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.24□□□□□ -1.57
SCN11AQ9UI33 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.24□□□□□ -1.57
SCN11AQ9UI33 AC084757.4-201ENST00000616350 526 ntBASIC5.24□□□□□ -1.57
SCN11AQ9UI33 AC012314.7-201ENST00000619693 93 ntBASIC5.24□□□□□ -1.57
SCN11AQ9UI33 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.24□□□□□ -1.57
SCN11AQ9UI33 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SCN11AQ9UI33 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.23□□□□□ -1.57
SCN11AQ9UI33 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SCN11AQ9UI33 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SCN11AQ9UI33 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.23□□□□□ -1.57
SCN11AQ9UI33 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SCN11AQ9UI33 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SCN11AQ9UI33 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SCN11AQ9UI33 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SCN11AQ9UI33 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SCN11AQ9UI33 RNA5SP119-201ENST00000362715 117 ntBASIC5.23□□□□□ -1.57
SCN11AQ9UI33 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC5.23□□□□□ -1.57
SCN11AQ9UI33 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.23□□□□□ -1.57
SCN11AQ9UI33 AL139247.1-201ENST00000422768 325 ntBASIC5.23□□□□□ -1.57
SCN11AQ9UI33 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.23□□□□□ -1.57
SCN11AQ9UI33 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.23□□□□□ -1.57
SCN11AQ9UI33 AC012158.1-204ENST00000483430 465 ntBASIC5.23□□□□□ -1.57
SCN11AQ9UI33 MIR3936-201ENST00000584304 110 ntBASIC5.23□□□□□ -1.57
SCN11AQ9UI33 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.23□□□□□ -1.57
SCN11AQ9UI33 AL049634.3-201ENST00000604968 457 ntBASIC5.23□□□□□ -1.57
SCN11AQ9UI33 AC063952.1-203ENST00000634410 658 ntBASIC5.23□□□□□ -1.57
SCN11AQ9UI33 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SCN11AQ9UI33 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SCN11AQ9UI33 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.23□□□□□ -1.57
SCN11AQ9UI33 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
SCN11AQ9UI33 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
SCN11AQ9UI33 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms